C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: VPS10 domain receptor protein SORCS 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043531 Sorcs1 10090 - 19:50143301-50678646 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000072685 Sorcs1-201 50143301-50678646 protein_coding
  ENSMUST00000111756 Sorcs1-202 50152692-50678485 protein_coding
  ENSMUST00000164039 Sorcs1-203 50147660-50678646 protein_coding
  ENSMUST00000168357 Sorcs1-204 50150998-50252678 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072685ENSMUST00000111756ENSMUST00000164039ENSMUST00000168357
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072685 N/A 0.247±0.00 0.201±0.00 1.408±0.47 N/A N/A 0.012±0.00 N/A 0.027±0.00 0.063±0.00 N/A 0.091±0.06 0.061±0.00 0.036±0.01
ENSMUST00000111756 N/A 0.075±0.00 N/A 5.546±0.00 0.236±0.00 0.060±0.00 0.067±0.01 0.097±0.00 0.055±0.02 0.051±0.00 N/A 0.122±0.06 0.062±0.04 0.045±0.00
ENSMUST00000164039 0.022±0.00 0.072±0.02 N/A 3.547±1.16 0.121±0.06 0.134±0.05 0.017±0.01 0.085±0.00 N/A 0.068±0.04 0.071±0.00 0.099±0.05 0.088±0.06 0.013±0.01
ENSMUST00000168357 0.060±0.00 0.082±0.01 N/A N/A 0.268±0.10 0.098±0.04 0.074±0.04 0.053±0.02 0.088±0.00 N/A N/A 0.211±0.08 0.050±0.02 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076333 SORCS1 sortilin-related VPS10 domain containing receptor 1 protein_coding Danio_rerio
ENSG00000108018 SORCS1 sortilin-related VPS10 domain containing receptor 1 protein_coding Homo_sapiens

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