C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: VPS10 domain receptor protein SORCS 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072685 Sorcs1-201 ENSMUSG00000043531 10090 - 19:50143301-50678646 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartLiverLungOvaryPlacentaTestisENSMUST00000072685
Transcript ID Adrenal Bladder Brain Heart Liver Lung Ovary Placenta Testis
ENSMUST00000072685 0.247±0.00 0.201±0.00 1.408±0.47 0.012±0.00 0.027±0.00 0.063±0.00 0.091±0.06 0.061±0.00 0.036±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263054 SORCS1-001 protein_coding Homo_sapiens 0 3980
ENST00000344440 SORCS1-201 protein_coding Homo_sapiens 0 3483
ENST00000369698 SORCS1-002 protein_coding Homo_sapiens 0 2588
ENST00000486192 SORCS1-006 retained_intron Homo_sapiens 0 435
ENST00000612154 SORCS1-202 protein_coding Homo_sapiens 0 3483
ENST00000622431 SORCS1-203 protein_coding Homo_sapiens 0 3483

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