C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RELT-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044024 Rell2 10090 + 18:37955079-37959179 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070709 Rell2-001 37955559-37959179 protein_coding
  ENSMUST00000091932 Rell2-002 37955624-37959163 protein_coding
  ENSMUST00000163128 Rell2-004 37955079-37958545 nonsense_mediated_decay
  ENSMUST00000163591 Rell2-005 37955589-37958545 protein_coding
  ENSMUST00000164499 Rell2-008 37956693-37958039 retained_intron
  ENSMUST00000166531 Rell2-009 37956734-37958169 retained_intron
  ENSMUST00000168056 Rell2-003 37955139-37958545 nonsense_mediated_decay
  ENSMUST00000169360 Rell2-011 37955588-37957678 protein_coding
  ENSMUST00000169498 Rell2-012 37955704-37958320 protein_coding
  ENSMUST00000176104 Rell2-010 37955147-37958545 protein_coding
  ENSMUST00000176902 Rell2-006 37955139-37959120 protein_coding
  ENSMUST00000177058 Rell2-007 37955563-37959171 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverOvaryTestisENSMUST00000163128ENSMUST00000169360ENSMUST00000176104
Transcript ID Adrenal Brain Liver Ovary Testis
ENSMUST00000163128 0.611±0.13 N/A 0.116±0.06 1.242±0.00 0.995±0.02
ENSMUST00000169360 N/A 109.608±0.00 N/A N/A N/A
ENSMUST00000176104 N/A N/A 0.118±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QE CIL_0006QE_0002 CGP 18:37935844-37959179
CIL_0006QB CIL_0006QB_0002 CGP 18:37955079-37969774

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005518 IDA collagen binding
GO:0005604 IDA basement membrane
GO:0005886 IEA plasma membrane
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0016021 IEA integral component of membrane
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071876 RELL2 RELT-like 2 protein_coding Danio_rerio
ENSG00000164620 RELL2 RELT-like 2 protein_coding Homo_sapiens

Loading