C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RELT-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176104 Rell2-010 ENSMUSG00000044024 10090 + 18:37955147-37958545 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000176104
Transcript ID Liver
ENSMUST00000176104 0.118±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QE CIL_0006QE_0002 CGP 18:37935844-37959179
CIL_0006QB CIL_0006QB_0002 CGP 18:37955079-37969774

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005518 IDA collagen binding
GO:0005604 IDA basement membrane
GO:0005886 IEA plasma membrane
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0016021 IEA integral component of membrane
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297164 RELL2-001 protein_coding Homo_sapiens 0 1483
ENST00000435817 FCHSD1-001 protein_coding Homo_sapiens 0 267
ENST00000444782 RELL2-201 protein_coding Homo_sapiens 0 1138
ENST00000517794 RELL2-006 processed_transcript Homo_sapiens 0 832
ENST00000518025 RELL2-002 processed_transcript Homo_sapiens 0 835
ENST00000518856 RELL2-005 protein_coding Homo_sapiens 0 749
ENST00000520674 RELL2-003 processed_transcript Homo_sapiens 0 835
ENST00000520747 FCHSD1-006 retained_intron Homo_sapiens 0 267
ENST00000521367 RELL2-004 protein_coding Homo_sapiens 0 713
ENST00000523856 FCHSD1-004 processed_transcript Homo_sapiens 0 267

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