C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: formin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044042 Fmn1 10090 + 2:113327736-113716767 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099576 Fmn1-201 113327736-113716767 protein_coding
  ENSMUST00000102547 Fmn1-001 113327782-113709855 protein_coding
  ENSMUST00000110954 Fmn1-003 113327771-113498056 processed_transcript
  ENSMUST00000145891 Fmn1-006 113685105-113709734 processed_transcript
  ENSMUST00000150510 Fmn1-007 113685090-113693151 processed_transcript
  ENSMUST00000152255 Fmn1-004 113685105-113709852 processed_transcript
  ENSMUST00000153151 Fmn1-005 113708671-113709730 processed_transcript
  ENSMUST00000161731 Fmn1-008 113363840-113709606 protein_coding
  ENSMUST00000185668 Fmn1-002 113441064-113709855 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverLungMuscleOvaryPlacentaTestisENSMUST00000099576ENSMUST00000102547ENSMUST00000145891ENSMUST00000153151ENSMUST00000161731ENSMUST00000185668
Transcript ID Adrenal Brain Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099576 0.317±0.00 1.160±0.00 N/A N/A 0.016±0.01 N/A 0.058±0.00 1.888±0.65
ENSMUST00000102547 N/A N/A N/A N/A N/A N/A N/A 2.100±0.09
ENSMUST00000145891 N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A
ENSMUST00000153151 N/A N/A N/A N/A N/A N/A N/A 97.660±6.67
ENSMUST00000161731 N/A N/A N/A N/A N/A 0.385±0.00 N/A N/A
ENSMUST00000185668 0.480±0.00 0.061±0.00 0.085±0.00 0.298±0.00 N/A 1.096±0.12 0.198±0.06 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001822 IMP kidney development
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005884 IEA actin filament
GO:0005886 IEA plasma membrane
GO:0008017 IDA microtubule binding
GO:0010467 IMP gene expression
GO:0015630 IDA microtubule cytoskeleton
GO:0017124 IPI SH3 domain binding
GO:0030054 IEA cell junction
GO:0030838 IDA positive regulation of actin filament polymerization
GO:0035136 IMP forelimb morphogenesis
GO:0035137 IMP hindlimb morphogenesis
GO:0045010 IEA actin nucleation
GO:0048705 IMP skeletal system morphogenesis
GO:0048813 IGI dendrite morphogenesis
GO:0051127 IDA positive regulation of actin nucleation
GO:0051894 IMP positive regulation of focal adhesion assembly
GO:0060173 IMP limb development
GO:0072092 IMP ureteric bud invasion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011975 fmn1 formin 1 protein_coding Danio_rerio
ENSDARG00000086384 FMN1 (2 of 2) formin 1 protein_coding Danio_rerio
ENSDARG00000088133 formin 1 protein_coding Danio_rerio
ENSDARG00000088538 formin 1 protein_coding Danio_rerio
ENSG00000248905 FMN1 formin 1 protein_coding Homo_sapiens

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