C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: formin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000248905 FMN1 9606 - 15:32765545-33194733 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320930 FMN1-004 33149784-33194696 protein_coding
  ENST00000334528 FMN1-001 32765546-33067884 protein_coding
  ENST00000558197 FMN1-002 33062667-33068162 protein_coding
  ENST00000558628 FMN1-007 32908159-32926261 retained_intron
  ENST00000558711 FMN1-009 32899807-32902040 protein_coding
  ENST00000558882 FMN1-010 32774323-32860837 processed_transcript
  ENST00000559047 FMN1-005 32774310-33154914 protein_coding
  ENST00000559150 FMN1-006 33064426-33068032 processed_transcript
  ENST00000559610 FMN1-011 32810895-32888254 protein_coding
  ENST00000560317 FMN1-008 32899795-32926260 protein_coding
  ENST00000561249 FMN1-003 32774151-33155040 protein_coding
  ENST00000616417 FMN1-201 32765545-33194733 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320930ENST00000334528ENST00000558197ENST00000558628ENST00000559047ENST00000561249ENST00000616417
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320930 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.328±0.00 N/A N/A N/A
ENST00000334528 0.148±0.00 0.091±0.00 N/A 0.196±0.00 2.620±0.00 0.105±0.00 0.341±0.00 N/A 0.443±0.00 0.102±0.05 0.606±0.38 0.562±0.43 N/A
ENST00000558197 N/A N/A N/A N/A N/A N/A 0.105±0.00 0.258±0.00 1.981±0.00 N/A 0.956±0.00 N/A N/A
ENST00000558628 N/A N/A N/A N/A N/A N/A 1.447±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559047 N/A N/A 3.748±0.00 0.811±0.00 N/A 0.195±0.00 N/A 0.238±0.00 1.500±0.00 N/A 0.695±0.00 0.314±0.00 3.543±0.00
ENST00000561249 N/A N/A 2.390±0.00 1.156±0.00 N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A
ENST00000616417 N/A N/A 0.903±0.31 N/A N/A 0.067±0.00 0.140±0.00 N/A N/A 0.039±0.00 N/A 0.055±0.00 2.374±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097N CIL_00097N_0001 VISTA 15:32499326-33100458

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005884 IEA actin filament
GO:0005886 IEA plasma membrane
GO:0030054 IEA cell junction
GO:0045010 IEA actin nucleation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011975 fmn1 formin 1 protein_coding Danio_rerio
ENSDARG00000086384 FMN1 (2 of 2) formin 1 protein_coding Danio_rerio
ENSDARG00000088133 formin 1 protein_coding Danio_rerio
ENSDARG00000088538 formin 1 protein_coding Danio_rerio
ENSMUSG00000044042 Fmn1 formin 1 protein_coding Mus_musculus
ENSMUSG00000100934 FMN1 Formin-1 protein_coding Mus_musculus

Loading