C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102547 Fmn1-001 ENSMUSG00000044042 10090 + 2:113327782-113709855 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000102547
Transcript ID Testis
ENSMUST00000102547 2.100±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001822 IMP kidney development
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005884 IEA actin filament
GO:0005886 IEA plasma membrane
GO:0008017 IDA microtubule binding
GO:0010467 IMP gene expression
GO:0015630 IDA microtubule cytoskeleton
GO:0017124 IPI SH3 domain binding
GO:0030054 IEA cell junction
GO:0030838 IDA positive regulation of actin filament polymerization
GO:0035136 IMP forelimb morphogenesis
GO:0035137 IMP hindlimb morphogenesis
GO:0045010 IEA actin nucleation
GO:0048705 IMP skeletal system morphogenesis
GO:0048813 IGI dendrite morphogenesis
GO:0051127 IDA positive regulation of actin nucleation
GO:0051894 IMP positive regulation of focal adhesion assembly
GO:0060173 IMP limb development
GO:0072092 IMP ureteric bud invasion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320930 FMN1-004 protein_coding Homo_sapiens 0 704
ENST00000334528 FMN1-001 protein_coding Homo_sapiens 0 1581
ENST00000558197 FMN1-002 protein_coding Homo_sapiens 4.99997e-41 174
ENST00000558628 FMN1-007 retained_intron Homo_sapiens 0 303
ENST00000558882 FMN1-010 processed_transcript Homo_sapiens 0 590
ENST00000559047 FMN1-005 protein_coding Homo_sapiens 0 2294
ENST00000559150 FMN1-006 processed_transcript Homo_sapiens 9.99967e-42 174
ENST00000560317 FMN1-008 protein_coding Homo_sapiens 0 621
ENST00000561249 FMN1-003 protein_coding Homo_sapiens 0 1413
ENST00000616417 FMN1-201 protein_coding Homo_sapiens 0 2294

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