C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HEPACAM family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044156 Hepacam2 10090 - 6:3457089-3498297 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049985 Hepacam2-001 3457089-3494594 protein_coding
  ENSMUST00000183736 Hepacam2-004 3483320-3498297 protein_coding
  ENSMUST00000184051 Hepacam2-003 3483678-3487394 retained_intron
  ENSMUST00000184466 Hepacam2-002 3457395-3487380 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049985ENSMUST00000183736ENSMUST00000184051ENSMUST00000184466
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049985 0.173±0.08 N/A N/A 0.287±0.19 0.429±0.15 33.875±13.57 0.060±0.01 3.807±2.01 0.020±0.02 N/A 0.051±0.01 N/A N/A N/A
ENSMUST00000183736 0.566±0.22 0.126±0.00 N/A 0.450±0.00 0.980±0.57 15.073±0.00 0.251±0.04 4.693±0.43 0.067±0.04 1.209±0.08 0.057±0.00 0.529±0.42 0.032±0.00 3.127±0.39
ENSMUST00000184051 N/A N/A N/A N/A 0.180±0.00 N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184466 0.465±0.12 0.146±0.07 0.201±0.00 N/A 0.921±0.40 7.768±1.00 0.077±0.04 N/A 0.063±0.03 1.000±0.75 0.059±0.03 0.235±0.13 0.045±0.01 0.645±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E8 CIL_0008E8_0002 VISTA 6:3209886-3814285
CIL_0006E0 CIL_0006E0_0002 CGP 6:3372257-3498297
CIL_0004ST CIL_0004ST_0003 CGP 6:3457089-3603319

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005794 ISS Golgi apparatus
GO:0005813 ISS centrosome
GO:0005819 ISS spindle
GO:0007067 IEA mitotic nuclear division
GO:0016021 IEA integral component of membrane
GO:0030496 ISS midbody
GO:0051297 ISS centrosome organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061365 hepacam2 HEPACAM family member 2 protein_coding Danio_rerio
ENSG00000188175 HEPACAM2 HEPACAM family member 2 protein_coding Homo_sapiens

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