C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HEPACAM family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188175 HEPACAM2 9606 - 7:93188586-93226524 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341723 HEPACAM2-002 93188586-93219582 protein_coding
  ENST00000394468 HEPACAM2-001 93188586-93226524 protein_coding
  ENST00000440868 HEPACAM2-004 93188586-93219545 protein_coding
  ENST00000453812 HEPACAM2-003 93188879-93226469 protein_coding
  ENST00000492616 HEPACAM2-005 93188967-93205647 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000341723ENST00000394468ENST00000440868ENST00000453812ENST00000492616
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000341723 N/A N/A N/A N/A 2.140±0.00 N/A N/A N/A N/A N/A 0.183±0.00
ENST00000394468 N/A 0.722±0.00 N/A 4.663±4.52 4.675±1.75 3.596±0.00 N/A N/A N/A N/A N/A
ENST00000440868 0.016±0.00 0.411±0.00 0.026±0.01 0.032±0.00 N/A N/A N/A N/A N/A N/A 0.409±0.00
ENST00000453812 N/A N/A 0.004±0.00 N/A 1.003±0.00 1.688±1.66 0.024±0.00 N/A 0.041±0.04 0.050±0.00 0.900±0.00
ENST00000492616 N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 0.112±0.00 0.033±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E8 CIL_0008E8_0001 VISTA 7:92945640-93549905
CIL_0006E0 CIL_0006E0_0001 CGP 7:93130055-93226524
CIL_0004ST CIL_0004ST_0002 CGP 7:93188586-93361121

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005794 IDA Golgi apparatus
GO:0005813 IDA centrosome
GO:0005819 IDA spindle
GO:0007067 IEA mitotic nuclear division
GO:0016021 IEA integral component of membrane
GO:0030496 IDA midbody
GO:0051297 IMP centrosome organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061365 hepacam2 HEPACAM family member 2 protein_coding Danio_rerio
ENSMUSG00000044156 Hepacam2 HEPACAM family member 2 protein_coding Mus_musculus

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