C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006E0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177409-ENSG00000188175 CGP 9606 7:93130055-93226524
GeneTranscriptPositionBiotype
ENSG00000177409 (SAMD9L)
sterile alpha motif domain containing 9-like 		ENST00000318238 (SAMD9L-001) 93130055-93148368 protein_coding
ENST00000411955 (SAMD9L-007) 93130763-93148354 protein_coding
ENST00000414791 (SAMD9L-004) 93135763-93148345 protein_coding
ENST00000437805 (SAMD9L-005) 93131033-93148345 protein_coding
ENST00000439952 (SAMD9L-003) 93135763-93148345 protein_coding
ENST00000446033 (SAMD9L-006) 93135763-93148345 protein_coding
ENST00000446959 (SAMD9L-002) 93135763-93148345 protein_coding
ENST00000477816 (SAMD9L-008) 93145606-93148369 processed_transcript
ENST00000610760 (SAMD9L-201) 93131217-93135971 protein_coding
ENSG00000188175 (HEPACAM2)
HEPACAM family member 2 		ENST00000341723 (HEPACAM2-002) 93188586-93219582 protein_coding
ENST00000394468 (HEPACAM2-001) 93188586-93226524 protein_coding
ENST00000440868 (HEPACAM2-004) 93188586-93219545 protein_coding
ENST00000453812 (HEPACAM2-003) 93188879-93226469 protein_coding
ENST00000492616 (HEPACAM2-005) 93188967-93205647 processed_transcript
CIL_0006E0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047735-ENSMUSG00000044156 CGP 10090 6:3372257-3498297
GeneTranscriptPositionBiotype
ENSMUSG00000044156 (Hepacam2)
HEPACAM family member 2 		ENSMUST00000049985 (Hepacam2-001) 3457089-3494594 protein_coding
ENSMUST00000183736 (Hepacam2-004) 3483320-3498297 protein_coding
ENSMUST00000184051 (Hepacam2-003) 3483678-3487394 retained_intron
ENSMUST00000184466 (Hepacam2-002) 3457395-3487380 nonsense_mediated_decay
ENSMUSG00000047735 (Samd9l)
sterile alpha motif domain containing 9-like 		ENSMUST00000120087 (Samd9l-001) 3372257-3399571 protein_coding
ENSMUST00000183576 (Samd9l-002) 3376950-3385005 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006E0_0001ENSG00000177409ENST00000318238ENST00000411955ENST00000414791ENST00000437805ENST00000439952ENST00000446033ENST00000446959ENST00000477816ENST00000610760ENSG00000188175ENST00000341723ENST00000394468ENST00000440868ENST00000453812ENST00000492616CIL_0006E0_0002ENSMUSG00000044156ENSMUST00000049985ENSMUST00000183736ENSMUST00000184051ENSMUST00000184466ENSMUSG00000047735ENSMUST00000120087ENSMUST00000183576
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006E0_0001ENSG00000177409ENST00000318238ENST00000411955ENST00000437805ENST00000446033ENST00000610760ENSG00000188175ENST00000341723ENST00000394468ENST00000440868ENST00000453812ENST00000492616CIL_0006E0_0002ENSMUSG00000044156ENSMUST00000049985ENSMUST00000183736ENSMUST00000184051ENSMUST00000184466ENSMUSG00000047735ENSMUST00000120087
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177409 ENST00000318238 N/A N/A 0.685±0.00 0.173±0.00 0.588±0.00 0.837±0.35 0.324±0.02 N/A N/A 3.131±0.00 N/A 0.460±0.14 0.473±0.29 N/A
ENST00000411955 0.227±0.00 0.534±0.00 1.026±0.00 N/A N/A N/A N/A 0.433±0.00 N/A N/A N/A 0.441±0.09 N/A N/A
ENST00000414791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437805 N/A N/A N/A N/A 2.236±0.00 0.235±0.00 N/A 0.310±0.15 0.672±0.00 2.751±0.00 N/A 0.485±0.15 0.449±0.00 0.257±0.00
ENST00000439952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.477±0.00 N/A N/A N/A
ENST00000446959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610760 N/A N/A N/A N/A N/A N/A N/A 1.161±0.00 N/A N/A 0.311±0.00 0.699±0.00 1.409±0.00 N/A
ENSG00000188175 ENST00000341723 N/A N/A N/A N/A N/A 2.140±0.00 N/A N/A N/A N/A N/A N/A N/A 0.183±0.00
ENST00000394468 N/A N/A 0.722±0.00 N/A 4.663±4.52 4.675±1.75 N/A 3.596±0.00 N/A N/A N/A N/A N/A N/A
ENST00000440868 N/A 0.016±0.00 0.411±0.00 0.026±0.01 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.409±0.00
ENST00000453812 N/A N/A N/A 0.004±0.00 N/A 1.003±0.00 N/A 1.688±1.66 0.024±0.00 N/A N/A 0.041±0.04 0.050±0.00 0.900±0.00
ENST00000492616 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A 0.112±0.00 0.033±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044156 ENSMUST00000049985 0.173±0.08 N/A N/A 0.287±0.19 0.429±0.15 33.875±13.57 0.060±0.01 3.807±2.01 0.020±0.02 N/A 0.051±0.01 N/A N/A N/A
ENSMUST00000183736 0.566±0.22 0.126±0.00 N/A 0.450±0.00 0.980±0.57 15.073±0.00 0.251±0.04 4.693±0.43 0.067±0.04 1.209±0.08 0.057±0.00 0.529±0.42 0.032±0.00 3.127±0.39
ENSMUST00000184051 N/A N/A N/A N/A 0.180±0.00 N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184466 0.465±0.12 0.146±0.07 0.201±0.00 N/A 0.921±0.40 7.768±1.00 0.077±0.04 N/A 0.063±0.03 1.000±0.75 0.059±0.03 0.235±0.13 0.045±0.01 0.645±0.32
ENSMUSG00000047735 ENSMUST00000120087 2.917±0.57 0.214±0.13 3.045±1.09 0.338±0.17 2.395±1.36 2.644±0.64 1.223±0.13 4.889±1.88 1.339±1.10 2.834±0.89 0.402±0.20 3.605±3.29 1.276±0.42 0.365±0.08
ENSMUST00000183576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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