C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interleukin 20 receptor beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044244 Il20rb 10090 - 9:100457719-100486788 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000098458 Il20rb-001 100457719-100486788 protein_coding
  ENSMUST00000122880 Il20rb-002 100465708-100486385 retained_intron
  ENSMUST00000125259 Il20rb-006 100458530-100461735 retained_intron
  ENSMUST00000136606 Il20rb-003 100457721-100466875 retained_intron
  ENSMUST00000136856 Il20rb-004 100457804-100461763 processed_transcript
  ENSMUST00000152756 Il20rb-005 100459077-100470609 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098458ENSMUST00000122880ENSMUST00000125259ENSMUST00000136606ENSMUST00000136856ENSMUST00000152756
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098458 0.833±0.27 0.203±0.02 0.339±0.10 0.293±0.04 1.010±0.57 0.417±0.23 0.143±0.10 0.128±0.05 0.220±0.08 0.977±0.55 0.395±0.20 1.832±0.61 0.408±0.13 0.329±0.14
ENSMUST00000122880 N/A 0.292±0.04 N/A N/A N/A 0.221±0.00 0.135±0.04 N/A 0.144±0.08 N/A 0.383±0.00 1.420±0.00 0.308±0.00 N/A
ENSMUST00000125259 1.097±0.33 0.187±0.04 0.409±0.00 0.273±0.00 N/A 0.281±0.02 0.104±0.00 0.322±0.05 0.276±0.13 0.677±0.00 0.319±0.00 2.048±0.81 0.359±0.09 0.354±0.00
ENSMUST00000136606 0.381±0.02 N/A 0.475±0.18 0.155±0.03 N/A 0.267±0.09 N/A N/A 0.134±0.04 N/A 0.142±0.00 0.647±0.00 0.183±0.07 0.158±0.07
ENSMUST00000136856 1.059±0.36 0.150±0.06 0.539±0.16 0.224±0.09 0.239±0.01 0.551±0.14 0.216±0.06 0.163±0.01 0.187±0.06 0.644±0.14 0.394±0.11 1.175±0.21 0.333±0.09 0.122±0.00
ENSMUST00000152756 N/A N/A N/A 0.175±0.00 N/A N/A N/A 0.242±0.01 N/A N/A 0.494±0.00 N/A N/A 0.392±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092H CIL_00092H_0002 VISTA 9:99866422-100468225
CIL_00092I CIL_00092I_0002 VISTA 9:99894020-100495329
CIL_0009A5 CIL_0009A5_0002 VISTA 9:99910151-100511937
CIL_0009A4 CIL_0009A4_0002 VISTA 9:99971528-100572973

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001808 IMP negative regulation of type IV hypersensitivity
GO:0002437 IMP inflammatory response to antigenic stimulus
GO:0002765 IMP immune response-inhibiting signal transduction
GO:0032689 IMP negative regulation of interferon-gamma production
GO:0032703 IMP negative regulation of interleukin-2 production
GO:0032733 IMP positive regulation of interleukin-10 production
GO:0032753 IMP positive regulation of interleukin-4 production
GO:0042015 IPI interleukin-20 binding
GO:0042130 IMP negative regulation of T cell proliferation
GO:0048873 IMP homeostasis of number of cells within a tissue
GO:0050863 IMP regulation of T cell activation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075181 crfb16 cytokine receptor family member B16 protein_coding Danio_rerio
ENSG00000174564 IL20RB interleukin 20 receptor beta protein_coding Homo_sapiens

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