C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 20 receptor beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098458 Il20rb-001 ENSMUSG00000044244 10090 - 9:100457719-100486788 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098458 0.833±0.27 0.203±0.02 0.339±0.10 0.293±0.04 1.010±0.57 0.417±0.23 0.143±0.10 0.128±0.05 0.220±0.08 0.977±0.55 0.395±0.20 1.832±0.61 0.408±0.13 0.329±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092H CIL_00092H_0002 VISTA 9:99866422-100468225
CIL_00092I CIL_00092I_0002 VISTA 9:99894020-100495329
CIL_0009A5 CIL_0009A5_0002 VISTA 9:99910151-100511937
CIL_0009A4 CIL_0009A4_0002 VISTA 9:99971528-100572973

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001808 IMP negative regulation of type IV hypersensitivity
GO:0002437 IMP inflammatory response to antigenic stimulus
GO:0002765 IMP immune response-inhibiting signal transduction
GO:0032689 IMP negative regulation of interferon-gamma production
GO:0032703 IMP negative regulation of interleukin-2 production
GO:0032733 IMP positive regulation of interleukin-10 production
GO:0032753 IMP positive regulation of interleukin-4 production
GO:0042015 IPI interleukin-20 binding
GO:0042130 IMP negative regulation of T cell proliferation
GO:0048873 IMP homeostasis of number of cells within a tissue
GO:0050863 IMP regulation of T cell activation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309741 IL20RB-201 protein_coding Homo_sapiens 0 542
ENST00000329582 IL20RB-001 protein_coding Homo_sapiens 0 913
ENST00000469964 IL20RB-002 nonsense_mediated_decay Homo_sapiens 0 431
ENST00000475972 IL20RB-003 nonsense_mediated_decay Homo_sapiens 0 512
ENST00000491483 IL20RB-004 nonsense_mediated_decay Homo_sapiens 0 651

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