C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: crumbs homolog 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071826 Crb3-001 ENSMUSG00000044279 10090 + 17:57059105-57065912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000071826
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000071826 0.039±0.00 0.085±0.04 0.192±0.03 1.096±0.50 0.121±0.01 4.583±0.00 1.879±0.98 1.207±0.04 3.226±0.00 0.546±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CX CIL_0004CX_0002 CGP 17:57032773-57059863
CIL_0004CR CIL_0004CR_0002 CGP 17:57043711-57065918
CIL_0002QU CIL_0002QU_0002 CGP 17:57059105-57078510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005923 IEA tight junction
GO:0016021 IEA integral component of membrane
GO:0016324 ISA apical plasma membrane
GO:0045177 IDA apical part of cell
GO:0045198 ISA establishment of epithelial cell apical/basal polarity
GO:0045216 ISA cell-cell junction organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000598494 CRB3-003 protein_coding Homo_sapiens 2e-22 111

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