C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044533 Rps2 10090 + 17:24718116-24721929 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054289 Rps2-001 24720110-24721929 protein_coding
  ENSMUST00000122809 Rps2-004 24720273-24721332 retained_intron
  ENSMUST00000129580 Rps2-005 24720823-24721867 retained_intron
  ENSMUST00000129984 Rps2-007 24720262-24721307 retained_intron
  ENSMUST00000132803 Rps2-006 24721449-24721925 retained_intron
  ENSMUST00000146867 Rps2-002 24720251-24721925 protein_coding
  ENSMUST00000152407 Rps2-003 24718116-24721720 protein_coding
  ENSMUST00000170715 Rps2-201 24720063-24721926 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054289ENSMUST00000129580ENSMUST00000132803ENSMUST00000146867ENSMUST00000152407ENSMUST00000170715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054289 N/A N/A N/A N/A N/A N/A N/A N/A 104.716±49.30 N/A N/A 85.592±24.32 129.298±69.38 N/A
ENSMUST00000129580 N/A 246.636±39.38 N/A N/A 191.908±47.03 200.724±0.00 N/A N/A N/A N/A N/A 82.484±3.42 49.547±0.00 N/A
ENSMUST00000132803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 500.978±67.17 94.274±0.00 N/A
ENSMUST00000146867 N/A 469.835±114.94 N/A N/A N/A 182.502±63.49 N/A 175.694±6.28 380.316±30.66 N/A N/A N/A N/A N/A
ENSMUST00000152407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.623±5.49
ENSMUST00000170715 631.669±307.27 96.668±0.00 623.693±25.52 367.535±166.07 543.270±177.84 698.915±154.23 432.956±67.40 483.322±83.78 789.100±604.90 473.036±13.42 322.021±21.55 736.265±247.87 455.770±270.65 100.966±38.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001W5 CIL_0001W5_0002 CGP 17:24718116-24724478

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0006412 IEA translation
GO:0015935 IEA small ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077291 rps2 ribosomal protein S2 protein_coding Danio_rerio

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