C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045624 Esf1 10090 - 2:140119883-140170564 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046030 Esf1-001 140119883-140170564 protein_coding
  ENSMUST00000137005 Esf1-003 140156886-140160483 retained_intron
  ENSMUST00000141086 Esf1-002 140159363-140160483 retained_intron
  ENSMUST00000151317 Esf1-004 140156921-140158843 retained_intron
  ENSMUST00000153769 Esf1-005 140148810-140155305 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046030ENSMUST00000137005ENSMUST00000151317ENSMUST00000153769
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046030 0.363±0.08 0.997±0.25 2.524±0.74 7.221±7.38 0.437±0.24 0.447±0.16 0.425±0.15 0.518±0.23 2.740±2.34 1.101±0.45 2.987±0.32 3.593±7.05 14.943±14.56 3.235±5.21
ENSMUST00000137005 N/A N/A N/A N/A N/A N/A 0.460±0.00 N/A 0.526±0.00 N/A N/A N/A N/A N/A
ENSMUST00000151317 N/A N/A N/A N/A 0.381±0.00 0.610±0.00 N/A 0.897±0.00 0.663±0.14 N/A N/A N/A N/A N/A
ENSMUST00000153769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.787±1.05 N/A 33.287±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DC CIL_0002DC_0002 CGP 2:139833480-140170564

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008740 esf1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000089048 ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) protein_coding Homo_sapiens

Loading