C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002DC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000089123-ENSG00000089048 CGP 9606 20:13389392-13784886
GeneTranscriptPositionBiotype
ENSG00000089048 (ESF1)
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) 		ENST00000202816 (ESF1-001) 13714322-13784886 protein_coding
ENST00000617257 (ESF1-201) 13728399-13782597 protein_coding
ENSG00000089123 (TASP1)
taspase, threonine aspartase, 1 		ENST00000337743 (TASP1-001) 13389392-13638940 protein_coding
ENST00000434275 (TASP1-002) 13614667-13630011 protein_coding
ENST00000455532 (TASP1-006) 13483227-13638903 protein_coding
ENST00000465381 (TASP1-007) 13435044-13638903 processed_transcript
ENST00000476108 (TASP1-004) 13587250-13638903 processed_transcript
ENST00000480436 (TASP1-003) 13389392-13638903 processed_transcript
ENST00000483898 (TASP1-005) 13587250-13638903 processed_transcript
ENSG00000236811 (GAPDHP2)
glyceraldehyde-3-phosphate dehydrogenase pseudogene 2 		ENST00000432206 (GAPDHP2-001) 13392677-13393674 processed_pseudogene
ENSG00000275098 (AL158089.1)
 ENST00000619057 (AL158089.1-201) 13509635-13509744 miRNA
CIL_0002DC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039033-ENSMUSG00000045624 CGP 10090 2:139833480-140170564
GeneTranscriptPositionBiotype
ENSMUSG00000039033 (Tasp1)
taspase, threonine aspartase 1 		ENSMUST00000046656 (Tasp1-002) 139833480-140066760 protein_coding
ENSMUST00000099304 (Tasp1-201) 139833480-140066785 protein_coding
ENSMUST00000110079 (Tasp1-001) 139833480-140066805 protein_coding
ENSMUST00000124949 (Tasp1-003) 139976532-140042214 retained_intron
ENSMUSG00000045624 (Esf1)
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) 		ENSMUST00000046030 (Esf1-001) 140119883-140170564 protein_coding
ENSMUST00000137005 (Esf1-003) 140156886-140160483 retained_intron
ENSMUST00000141086 (Esf1-002) 140159363-140160483 retained_intron
ENSMUST00000151317 (Esf1-004) 140156921-140158843 retained_intron
ENSMUST00000153769 (Esf1-005) 140148810-140155305 retained_intron
ENSMUSG00000080006 (Rps19-ps7)
ribosomal protein S19, pseudogene 7 		ENSMUST00000116122 (Rps19-ps7-001) 140073032-140073469 processed_pseudogene
ENSMUSG00000081446 (Gm14068)
predicted gene 14068 		ENSMUST00000122272 (Gm14068-001) 140044492-140044704 processed_pseudogene
ENSMUSG00000084207 (Gm14070)
predicted gene 14070 		ENSMUST00000120773 (Gm14070-001) 139863297-139863724 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DC_0001ENSG00000089048ENST00000202816ENST00000617257ENSG00000089123ENST00000337743ENST00000434275ENST00000455532ENST00000465381ENST00000476108ENST00000480436ENST00000483898ENSG00000236811ENST00000432206ENSG00000275098ENST00000619057CIL_0002DC_0002ENSMUSG00000039033ENSMUST00000046656ENSMUST00000099304ENSMUST00000110079ENSMUST00000124949ENSMUSG00000045624ENSMUST00000046030ENSMUST00000137005ENSMUST00000141086ENSMUST00000151317ENSMUST00000153769ENSMUSG00000080006ENSMUST00000116122ENSMUSG00000081446ENSMUST00000122272ENSMUSG00000084207ENSMUST00000120773
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DC_0001ENSG00000089048ENST00000202816ENST00000617257ENSG00000089123ENST00000337743ENST00000455532ENST00000465381ENST00000480436ENSG00000236811ENST00000432206ENSG00000275098ENST00000619057CIL_0002DC_0002ENSMUSG00000039033ENSMUST00000046656ENSMUST00000099304ENSMUST00000110079ENSMUST00000124949ENSMUSG00000045624ENSMUST00000046030ENSMUST00000137005ENSMUST00000151317ENSMUST00000153769ENSMUSG00000080006ENSMUST00000116122ENSMUSG00000081446ENSMUST00000122272ENSMUSG00000084207ENSMUST00000120773
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089048 ENST00000202816 2.222±0.00 3.908±0.00 N/A 3.806±0.00 3.296±0.60 2.478±1.58 1.728±1.03 3.858±0.00 1.941±0.03 1.380±0.00 2.064±1.79 3.637±0.01 1.970±1.67 8.421±2.38
ENST00000617257 0.968±0.00 N/A 1.460±0.00 1.975±0.00 1.313±0.49 1.445±0.00 0.871±0.12 1.476±0.00 1.858±0.00 2.007±0.00 N/A 10.561±8.16 7.394±0.00 9.812±8.02
ENSG00000089123 ENST00000337743 1.571±0.00 2.857±0.00 0.178±0.00 1.425±0.75 1.121±0.00 0.631±0.17 0.579±0.10 N/A 0.626±0.20 0.622±0.06 0.366±0.00 2.183±0.53 1.928±0.41 2.456±0.36
ENST00000434275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455532 1.044±0.00 N/A 1.984±0.00 3.269±0.00 3.860±0.00 N/A 0.296±0.00 1.118±0.00 4.246±0.00 3.329±0.00 0.408±0.00 2.136±0.07 0.525±0.00 3.354±0.00
ENST00000465381 N/A N/A N/A 1.198±0.00 N/A 0.916±0.00 0.659±0.00 N/A N/A N/A 0.195±0.00 1.756±0.60 N/A N/A
ENST00000476108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480436 N/A N/A N/A 1.281±0.00 0.447±0.00 0.746±0.00 N/A N/A 0.798±0.00 0.977±0.00 N/A 0.823±0.05 0.626±0.00 N/A
ENST00000483898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236811 ENST00000432206 N/A 0.171±0.00 N/A N/A 0.144±0.00 0.049±0.00 0.136±0.00 0.052±0.00 0.015±0.00 0.111±0.00 0.215±0.00 0.030±0.01 0.045±0.00 N/A
ENSG00000275098 ENST00000619057 N/A 0.565±0.00 N/A N/A 0.601±0.00 69.665±0.00 0.522±0.00 N/A N/A N/A N/A 0.518±0.00 N/A 0.261±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039033 ENSMUST00000046656 1.239±0.36 1.469±0.46 1.150±0.04 0.944±0.26 1.251±0.51 1.526±0.28 0.821±0.29 1.113±0.49 0.958±0.21 1.481±0.21 1.149±0.10 2.428±1.20 0.354±0.14 11.140±2.29
ENSMUST00000099304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.376±0.15 0.618±0.00 8.292±0.00
ENSMUST00000110079 0.365±0.00 N/A 1.836±0.23 2.620±0.34 0.905±0.51 N/A 0.893±0.49 1.021±0.40 2.138±1.21 0.580±0.14 1.222±0.61 1.654±0.91 0.850±0.42 3.198±0.54
ENSMUST00000124949 0.647±0.24 N/A N/A 0.976±0.09 0.904±0.04 0.771±0.04 0.582±0.00 0.829±0.00 1.067±0.37 0.891±0.05 N/A 0.959±0.38 0.416±0.24 N/A
ENSMUSG00000045624 ENSMUST00000046030 0.363±0.08 0.997±0.25 2.524±0.74 7.221±7.38 0.437±0.24 0.447±0.16 0.425±0.15 0.518±0.23 2.740±2.34 1.101±0.45 2.987±0.32 3.593±7.05 14.943±14.56 3.235±5.21
ENSMUST00000137005 N/A N/A N/A N/A N/A N/A 0.460±0.00 N/A 0.526±0.00 N/A N/A N/A N/A N/A
ENSMUST00000141086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151317 N/A N/A N/A N/A 0.381±0.00 0.610±0.00 N/A 0.897±0.00 0.663±0.14 N/A N/A N/A N/A N/A
ENSMUST00000153769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.787±1.05 N/A 33.287±0.00
ENSMUSG00000080006 ENSMUST00000116122 0.119±0.00 N/A 0.167±0.11 0.129±0.00 0.255±0.10 0.434±0.00 0.120±0.00 0.119±0.01 0.178±0.15 N/A 0.084±0.00 0.318±0.20 0.104±0.05 0.163±0.04
ENSMUSG00000081446 ENSMUST00000122272 N/A N/A N/A 1.507±0.00 N/A N/A N/A N/A 0.735±0.00 N/A N/A N/A 0.110±0.00 1.600±0.00
ENSMUSG00000084207 ENSMUST00000120773 N/A N/A N/A 0.182±0.06 N/A N/A 0.117±0.00 0.407±0.13 0.144±0.00 0.359±0.07 N/A 0.605±0.00 0.018±0.00 0.109±0.00

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