C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046030 Esf1-001 ENSMUSG00000045624 10090 - 2:140119883-140170564 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046030
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046030 0.363±0.08 0.997±0.25 2.524±0.74 7.221±7.38 0.437±0.24 0.447±0.16 0.425±0.15 0.518±0.23 2.740±2.34 1.101±0.45 2.987±0.32 3.593±7.05 14.943±14.56 3.235±5.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DC CIL_0002DC_0002 CGP 2:139833480-140170564

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000202816 ESF1-001 protein_coding Homo_sapiens 0 2575
ENST00000523153 RP11-30L15.4-001 processed_pseudogene Homo_sapiens 0 1703
ENST00000617257 ESF1-201 protein_coding Homo_sapiens 0 1663

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