Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	protocadherin beta 8
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000045876	Pcdhb8	10090	+	18:37355271-37357610	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000051163		Pcdhb8-201	37355271-37357610	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000051163	0.949±0.63	0.731±0.11	0.148±0.02	0.551±0.14	0.739±0.19	0.211±0.07	0.233±0.03	0.231±0.08	0.037±0.03	1.312±0.11	0.023±0.00	1.630±0.90	0.033±0.03	0.026±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00062S	CIL_00062S_000K	CGP	18:37341702-37357610
CIL_00062S	CIL_00062S_000O	CGP	18:37355271-37403909

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005509	IEA	calcium ion binding
GO:0005886	IEA	plasma membrane
GO:0007156	IEA	homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021	IEA	integral component of membrane

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000010684	CU915772.1	Uncharacterized protein	protein_coding	Danio_rerio
ENSDARG00000071889	pcdh2g8	protocadherin 2 gamma 8	protein_coding	Danio_rerio
ENSDARG00000071891	pcdh2g6	protocadherin 2 gamma 6	protein_coding	Danio_rerio
ENSDARG00000071892	CU915772.1	Uncharacterized protein	protein_coding	Danio_rerio
ENSDARG00000074738	pcdh2g9	protocadherin 2 gamma 9	protein_coding	Danio_rerio
ENSDARG00000077343	CT573264.2	Uncharacterized protein	protein_coding	Danio_rerio
ENSDARG00000077867	CT573264.3	Uncharacterized protein	protein_coding	Danio_rerio
ENSDARG00000079937	pcdh2g5	protocadherin 2 gamma 5	protein_coding	Danio_rerio
ENSG00000113209	PCDHB5	protocadherin beta 5	protein_coding	Homo_sapiens

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