C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon-induced protein with tetratricopeptide repeats 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045932 Ifit2 10090 + 19:34550694-34576419 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102826 Ifit2-001 34550710-34576419 protein_coding
  ENSMUST00000149829 Ifit2-002 34550694-34573192 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102826ENSMUST00000149829
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102826 1.451±0.22 0.312±0.21 1.991±0.05 0.500±0.08 1.141±0.40 0.507±0.29 0.674±0.24 1.459±0.15 0.956±0.72 2.513±0.39 0.223±0.04 0.797±0.38 0.626±0.35 0.094±0.06
ENSMUST00000149829 0.965±0.00 0.246±0.10 N/A N/A 0.620±0.00 0.507±0.29 N/A 1.143±0.16 N/A N/A N/A 0.530±0.29 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IT CIL_0001IT_0002 CGP 19:34492318-34576419
CIL_0007BE CIL_0007BE_0009 CGP 19:34550694-34588731

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0009615 IEA response to virus
GO:0032091 IEA negative regulation of protein binding
GO:0035457 IDA cellular response to interferon-alpha
GO:0043065 IEA positive regulation of apoptotic process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007467 si:dkey-26g8.11 si:dkey-26g8.11 protein_coding Danio_rerio
ENSDARG00000043584 ifit2 interferon-induced protein with tetratricopeptide repeats 2 protein_coding Danio_rerio
ENSDARG00000056976 si:ch211-240h7.2 si:ch211-240h7.2 protein_coding Danio_rerio
ENSDARG00000057173 zgc:123282 zgc:123282 protein_coding Danio_rerio
ENSDARG00000071012 si:dkey-116m16.3 si:dkey-116m16.3 protein_coding Danio_rerio
ENSDARG00000088069 CR759879.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090537 si:dkey-26g8.10 si:dkey-26g8.10 protein_coding Danio_rerio
ENSDARG00000090977 ifit5 interferon-induced protein with tetratricopeptide repeats 5 protein_coding Danio_rerio
ENSG00000119922 IFIT2 interferon-induced protein with tetratricopeptide repeats 2 protein_coding Homo_sapiens

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