C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon-induced protein with tetratricopeptide repeats 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102826 Ifit2-001 ENSMUSG00000045932 10090 + 19:34550710-34576419 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102826
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102826 1.451±0.22 0.312±0.21 1.991±0.05 0.500±0.08 1.141±0.40 0.507±0.29 0.674±0.24 1.459±0.15 0.956±0.72 2.513±0.39 0.223±0.04 0.797±0.38 0.626±0.35 0.094±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IT CIL_0001IT_0002 CGP 19:34492318-34576419
CIL_0007BE CIL_0007BE_0009 CGP 19:34550694-34588731

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0009615 IEA response to virus
GO:0032091 IEA negative regulation of protein binding
GO:0035457 IDA cellular response to interferon-alpha
GO:0043065 IEA positive regulation of apoptotic process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371826 IFIT2-001 protein_coding Homo_sapiens 0 665
ENST00000611722 IFIT2-201 protein_coding Homo_sapiens 0 665

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