C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon-induced protein with tetratricopeptide repeats 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119922 IFIT2 9606 + 10:89301955-89309276 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371826 IFIT2-001 89301955-89309276 protein_coding
  ENST00000611722 IFIT2-201 89302046-89308919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371826ENST00000611722
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371826 N/A 0.505±0.00 N/A 0.618±0.23 N/A N/A N/A N/A 0.153±0.04 1.542±0.58 N/A 0.707±0.22 N/A 0.318±0.00
ENST00000611722 2.219±0.00 2.459±0.00 1.915±0.00 2.044±0.82 3.488±1.50 1.324±0.44 1.179±0.31 3.556±0.14 1.032±0.21 4.447±1.30 0.437±0.37 1.867±0.78 5.683±1.13 1.746±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IW CIL_0001IW_0001 CGP 10:89205629-89414557
CIL_0001IT CIL_0001IT_0001 CGP 10:89213569-89414557
CIL_0007BE CIL_0007BE_0006 CGP 10:89301955-89340971

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005829 TAS cytosol
GO:0008637 TAS apoptotic mitochondrial changes
GO:0009615 IDA response to virus
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0032091 IDA negative regulation of protein binding
GO:0035457 IEA cellular response to interferon-alpha
GO:0043065 IDA positive regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding
GO:0051607 IEA defense response to virus
GO:0060337 TAS type I interferon signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007467 si:dkey-26g8.11 si:dkey-26g8.11 protein_coding Danio_rerio
ENSDARG00000043584 ifit2 interferon-induced protein with tetratricopeptide repeats 2 protein_coding Danio_rerio
ENSDARG00000056976 si:ch211-240h7.2 si:ch211-240h7.2 protein_coding Danio_rerio
ENSDARG00000057173 zgc:123282 zgc:123282 protein_coding Danio_rerio
ENSDARG00000071012 si:dkey-116m16.3 si:dkey-116m16.3 protein_coding Danio_rerio
ENSDARG00000088069 CR759879.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090537 si:dkey-26g8.10 si:dkey-26g8.10 protein_coding Danio_rerio
ENSDARG00000090977 ifit5 interferon-induced protein with tetratricopeptide repeats 5 protein_coding Danio_rerio
ENSMUSG00000045932 Ifit2 interferon-induced protein with tetratricopeptide repeats 2 protein_coding Mus_musculus

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