C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: suprabasin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046056 Sbsn 10090 + 7:30734739-30756134 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080518 Sbsn-001 30751562-30755988 protein_coding
  ENSMUST00000182227 Sbsn-003 30751555-30756134 protein_coding
  ENSMUST00000182229 Sbsn-002 30751471-30756134 protein_coding
  ENSMUST00000182488 Sbsn-006 30734739-30756126 processed_transcript
  ENSMUST00000182577 Sbsn-004 30752628-30756126 protein_coding
  ENSMUST00000182721 Sbsn-005 30751562-30756134 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000080518ENSMUST00000182229ENSMUST00000182488ENSMUST00000182577ENSMUST00000182721
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000080518 5.022±2.16 7.923±1.24 2.883±0.00 3.092±0.49 N/A N/A N/A 5.006±3.14 1.106±0.49 8.569±4.29 26.503±12.29
ENSMUST00000182229 13.577±5.61 68.770±6.37 7.229±0.00 7.618±1.87 N/A N/A N/A 23.723±14.07 3.422±0.00 11.477±11.46 317.366±164.44
ENSMUST00000182488 N/A N/A N/A N/A 5.428±0.87 6.082±0.00 4.433±0.00 N/A 3.245±0.00 8.367±2.63 N/A
ENSMUST00000182577 N/A N/A 1.366±0.00 N/A 0.633±0.00 N/A 0.392±0.00 N/A 0.477±0.14 3.598±1.93 N/A
ENSMUST00000182721 N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.801±0.00 111.974±30.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UZ CIL_0006UZ_0002 CGP 7:30727701-30743681

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005576 IEA extracellular region
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000189001 SBSN suprabasin protein_coding Homo_sapiens

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