C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006UZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039913-ENSDARG00000039914 CGP 7955 16:47854537-47904970
GeneTranscriptPositionBiotype
ENSDARG00000039913 (tmem147)
transmembrane protein 147 		ENSDART00000058383 (tmem147-001) 47854537-47877324 protein_coding
ENSDARG00000039914 (gapdhs)
glyceraldehyde-3-phosphate dehydrogenase, spermatogenic 		ENSDART00000058384 (gapdhs-001) 47879730-47904970 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006UZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000006315-ENSMUSG00000061099 CGP 10090 7:30727701-30743681
GeneTranscriptPositionBiotype
ENSMUSG00000006315 (Tmem147)
transmembrane protein 147 		ENSMUST00000006478 (Tmem147-201) 30727701-30729534 protein_coding
ENSMUSG00000046056 (Sbsn)
suprabasin 		ENSMUST00000080518 (Sbsn-001) 30751562-30755988 protein_coding
ENSMUST00000182227 (Sbsn-003) 30751555-30756134 protein_coding
ENSMUST00000182229 (Sbsn-002) 30751471-30756134 protein_coding
ENSMUST00000182488 (Sbsn-006) 30734739-30756126 processed_transcript
ENSMUST00000182577 (Sbsn-004) 30752628-30756126 protein_coding
ENSMUST00000182721 (Sbsn-005) 30751562-30756134 protein_coding
ENSMUSG00000061099 (Gapdhs)
glyceraldehyde-3-phosphate dehydrogenase, spermatogenic 		ENSMUST00000074758 (Gapdhs-003) 30729887-30739407 protein_coding
ENSMUST00000182067 (Gapdhs-002) 30729775-30733068 nonsense_mediated_decay
ENSMUST00000182634 (Gapdhs-001) 30729780-30743681 protein_coding
ENSMUSG00000097320 (C630016N16Rik)
RIKEN cDNA C630016N16 gene 		ENSMUST00000180820 (C630016N16Rik-001) 30729579-30745929 antisense
ENSMUST00000183194 (C630016N16Rik-002) 30732706-30737499 antisense
ENSMUSG00000098146 (Gm26935)
predicted gene, 26935 		ENSMUST00000182686 (Gm26935-001) 30737653-30748437 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UZ_0001ENSDARG00000039913ENSDART00000058383ENSDARG00000039914ENSDART00000058384CIL_0006UZ_0002ENSMUSG00000006315ENSMUST00000006478ENSMUSG00000046056ENSMUST00000080518ENSMUST00000182227ENSMUST00000182229ENSMUST00000182488ENSMUST00000182577ENSMUST00000182721ENSMUSG00000061099ENSMUST00000074758ENSMUST00000182067ENSMUST00000182634ENSMUSG00000097320ENSMUST00000180820ENSMUST00000183194ENSMUSG00000098146ENSMUST00000182686
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UZ_0001ENSDARG00000039913ENSDART00000058383ENSDARG00000039914ENSDART00000058384CIL_0006UZ_0002ENSMUSG00000006315ENSMUST00000006478ENSMUSG00000046056ENSMUST00000080518ENSMUST00000182229ENSMUST00000182488ENSMUST00000182577ENSMUST00000182721ENSMUSG00000061099ENSMUST00000074758ENSMUST00000182067ENSMUST00000182634ENSMUSG00000097320ENSMUST00000180820ENSMUSG00000098146ENSMUST00000182686
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039913 ENSDART00000058383 N/A N/A N/A 16.337±9.10 N/A N/A 22.919±13.54 25.566±10.19 5.195±0.00 N/A 8.425±0.00 N/A N/A N/A
ENSDARG00000039914 ENSDART00000058384 N/A N/A N/A 591.154±574.53 N/A N/A 107.130±111.13 35.765±48.83 6.369±0.00 N/A 114.906±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006315 ENSMUST00000006478 100.522±6.34 215.715±21.75 56.075±3.10 55.538±25.63 126.874±33.74 86.556±6.03 105.901±12.22 192.893±7.86 97.767±38.03 66.998±2.46 88.463±3.37 129.530±45.94 64.234±21.71 62.834±28.05
ENSMUSG00000046056 ENSMUST00000080518 5.022±2.16 7.923±1.24 2.883±0.00 N/A 3.092±0.49 N/A N/A N/A N/A 5.006±3.14 1.106±0.49 8.569±4.29 26.503±12.29 N/A
ENSMUST00000182227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182229 13.577±5.61 68.770±6.37 7.229±0.00 N/A 7.618±1.87 N/A N/A N/A N/A 23.723±14.07 3.422±0.00 11.477±11.46 317.366±164.44 N/A
ENSMUST00000182488 N/A N/A N/A N/A N/A 5.428±0.87 N/A 6.082±0.00 4.433±0.00 N/A 3.245±0.00 8.367±2.63 N/A N/A
ENSMUST00000182577 N/A N/A 1.366±0.00 N/A N/A 0.633±0.00 N/A N/A 0.392±0.00 N/A 0.477±0.14 3.598±1.93 N/A N/A
ENSMUST00000182721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.801±0.00 111.974±30.43 N/A
ENSMUSG00000061099 ENSMUST00000074758 N/A N/A N/A N/A N/A N/A 0.721±0.00 N/A N/A N/A N/A N/A N/A 613.632±144.62
ENSMUST00000182067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1016.248±17.53
ENSMUST00000182634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 148.758±14.38
ENSMUSG00000097320 ENSMUST00000180820 9.882±1.16 8.766±1.04 9.335±0.00 14.452±7.35 8.430±0.29 3.871±0.59 3.590±0.92 7.041±1.16 4.384±1.54 7.106±0.84 2.332±0.60 7.171±1.36 N/A N/A
ENSMUST00000183194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000098146 ENSMUST00000182686 0.359±0.19 0.368±0.23 0.374±0.00 1.889±1.22 0.192±0.05 0.244±0.07 0.118±0.04 0.235±0.10 0.154±0.09 0.159±0.03 0.275±0.02 3.189±3.12 0.789±0.57 0.769±0.77

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