C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suprabasin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080518 Sbsn-001 ENSMUSG00000046056 10090 + 7:30751562-30755988 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastLungMuscleOvaryPlacentaENSMUST00000080518
Transcript ID Adipose Adrenal Bladder Breast Lung Muscle Ovary Placenta
ENSMUST00000080518 5.022±2.16 7.923±1.24 2.883±0.00 3.092±0.49 5.006±3.14 1.106±0.49 8.569±4.29 26.503±12.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UZ CIL_0006UZ_0002 CGP 7:30727701-30743681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000452271 SBSN-002 protein_coding Homo_sapiens 0 307
ENST00000518157 SBSN-001 protein_coding Homo_sapiens 0 296

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