C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vacuolar protein sorting 13A (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046230 Vps13a 10090 - 19:16616763-16780822 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068156 Vps13a-201 16616763-16780822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068156
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068156 1.151±0.20 2.107±0.00 1.075±0.67 1.675±0.38 0.791±0.36 1.115±0.16 0.743±0.25 0.742±0.46 1.501±0.31 0.753±0.24 1.713±0.89 1.223±0.32 5.700±2.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021O CIL_00021O_0002 CGP 19:16435667-16780822

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0007399 IMP nervous system development
GO:0007626 IMP locomotory behavior
GO:0015031 IEA protein transport
GO:0031045 IDA dense core granule
GO:0035176 IMP social behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039225 vps13a vacuolar protein sorting 13 homolog A (S. cerevisiae) protein_coding Danio_rerio
ENSG00000197969 VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) protein_coding Homo_sapiens

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