C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: von Willebrand factor A domain containing 5B2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046613 Vwa5b2 10090 + 16:20589471-20605377 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046188 Vwa5b2-005 20602775-20605377 retained_intron
  ENSMUST00000096197 Vwa5b2-201 20589582-20605377 protein_coding
  ENSMUST00000100074 Vwa5b2-001 20589471-20598467 protein_coding
  ENSMUST00000145483 Vwa5b2-003 20590090-20592389 retained_intron
  ENSMUST00000149236 Vwa5b2-002 20590146-20598462 nonsense_mediated_decay
  ENSMUST00000159736 Vwa5b2-006 20589582-20590736 processed_transcript
  ENSMUST00000159780 Vwa5b2-004 20591156-20605374 protein_coding
  ENSMUST00000161257 Vwa5b2-008 20589851-20591220 retained_intron
  ENSMUST00000161715 Vwa5b2-009 20590059-20590531 retained_intron
  ENSMUST00000162919 Vwa5b2-007 20589584-20591186 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046188ENSMUST00000096197ENSMUST00000100074ENSMUST00000145483ENSMUST00000149236ENSMUST00000159780ENSMUST00000161257ENSMUST00000161715ENSMUST00000162919
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046188 0.124±0.09 N/A 0.786±0.00 N/A 0.053±0.04 0.787±0.00 0.013±0.01 0.041±0.04 0.030±0.02 0.048±0.04 0.028±0.01 0.153±0.13 0.032±0.01 0.065±0.03
ENSMUST00000096197 0.102±0.08 0.464±0.19 1.109±0.37 6.385±1.09 0.010±0.00 1.111±0.51 N/A 0.028±0.00 0.136±0.00 0.036±0.00 N/A 0.100±0.02 0.062±0.01 0.053±0.01
ENSMUST00000100074 N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A 0.130±0.00 0.029±0.00 N/A N/A N/A N/A
ENSMUST00000145483 N/A N/A N/A 4.216±0.00 N/A N/A 0.012±0.00 N/A 0.052±0.00 N/A N/A 0.072±0.00 0.054±0.02 0.027±0.00
ENSMUST00000149236 N/A N/A N/A N/A 0.039±0.01 N/A N/A 0.022±0.00 N/A N/A N/A 0.019±0.00 N/A N/A
ENSMUST00000159780 0.029±0.02 0.368±0.03 0.340±0.00 7.379±0.00 0.018±0.01 0.620±0.19 0.024±0.00 0.019±0.01 0.099±0.09 0.045±0.01 N/A 0.089±0.06 0.041±0.02 0.032±0.03
ENSMUST00000161257 N/A N/A N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A 0.126±0.00 N/A
ENSMUST00000161715 N/A N/A N/A N/A N/A N/A N/A 0.105±0.01 N/A N/A N/A N/A N/A N/A
ENSMUST00000162919 N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FP CIL_0005FP_0002 CGP 16:20548577-20605377
CIL_0005FO CIL_0005FO_0002 CGP 16:20589471-20610768

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075886 vwa5b2 von Willebrand factor A domain containing 5B2 protein_coding Danio_rerio
ENSG00000145198 VWA5B2 von Willebrand factor A domain containing 5B2 protein_coding Homo_sapiens

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