C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: von Willebrand factor A domain containing 5B2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159780 Vwa5b2-004 ENSMUSG00000046613 10090 + 16:20591156-20605374 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000159780
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000159780 0.029±0.02 0.368±0.03 0.340±0.00 7.379±0.00 0.018±0.01 0.620±0.19 0.024±0.00 0.019±0.01 0.099±0.09 0.045±0.01 0.089±0.06 0.041±0.02 0.032±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FP CIL_0005FP_0002 CGP 16:20548577-20605377
CIL_0005FO CIL_0005FO_0002 CGP 16:20589471-20610768

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273794 VWA5B2-006 protein_coding Homo_sapiens 0 3083
ENST00000426955 VWA5B2-001 protein_coding Homo_sapiens 0 3799
ENST00000461141 VWA5B2-002 retained_intron Homo_sapiens 0 2796
ENST00000474580 VWA5B2-004 retained_intron Homo_sapiens 0 503
ENST00000497229 VWA5B2-003 retained_intron Homo_sapiens 0 494

Loading