C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005FP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161204-ENSG00000145198 CGP 9606 3:184186023-184242329
GeneTranscriptPositionBiotype
ENSG00000145198 (VWA5B2)
von Willebrand factor A domain containing 5B2 		ENST00000273794 (VWA5B2-006) 184233416-184242283 protein_coding
ENST00000426955 (VWA5B2-001) 184230429-184242329 protein_coding
ENST00000461141 (VWA5B2-002) 184234520-184242329 retained_intron
ENST00000474580 (VWA5B2-004) 184235019-184236646 retained_intron
ENST00000493493 (VWA5B2-005) 184240427-184241404 retained_intron
ENST00000497229 (VWA5B2-003) 184232600-184234997 retained_intron
ENSG00000161204 (ABCF3)
ATP-binding cassette, sub-family F (GCN20), member 3 		ENST00000292808 (ABCF3-002) 184186174-184194005 protein_coding
ENST00000421340 (ABCF3-010) 184186095-184187958 nonsense_mediated_decay
ENST00000429586 (ABCF3-001) 184186023-184194007 protein_coding
ENST00000463685 (ABCF3-012) 184186160-184187046 retained_intron
ENST00000466416 (ABCF3-015) 184186199-184187658 retained_intron
ENST00000466742 (ABCF3-008) 184189830-184194006 retained_intron
ENST00000468892 (ABCF3-007) 184189633-184194002 retained_intron
ENST00000471226 (ABCF3-016) 184188314-184189725 retained_intron
ENST00000472608 (ABCF3-020) 184188334-184189959 retained_intron
ENST00000473311 (ABCF3-003) 184186176-184194012 retained_intron
ENST00000475728 (ABCF3-019) 184188790-184189701 retained_intron
ENST00000478288 (ABCF3-013) 184186161-184187901 retained_intron
ENST00000480539 (ABCF3-018) 184193150-184193769 retained_intron
ENST00000480562 (ABCF3-009) 184190864-184194006 retained_intron
ENST00000481116 (ABCF3-014) 184186191-184187613 retained_intron
ENST00000485921 (ABCF3-011) 184186104-184187283 retained_intron
ENST00000489719 (ABCF3-017) 184188809-184189880 retained_intron
ENST00000498136 (ABCF3-005) 184186196-184188827 retained_intron
ENSG00000214160 (ALG3)
ALG3, alpha-1,3- mannosyltransferase 		ENST00000397676 (ALG3-001) 184242334-184248971 protein_coding
ENST00000411922 (ALG3-004) 184242301-184248962 nonsense_mediated_decay
ENST00000414845 (ALG3-013) 184242885-184248933 nonsense_mediated_decay
ENST00000423996 (ALG3-007) 184243791-184248949 nonsense_mediated_decay
ENST00000445626 (ALG3-002) 184242425-184249548 protein_coding
ENST00000446569 (ALG3-014) 184242574-184248935 protein_coding
ENST00000455059 (ALG3-003) 184242469-184249520 protein_coding
ENST00000461415 (ALG3-006) 184244759-184248950 retained_intron
ENST00000462735 (ALG3-010) 184243554-184245021 retained_intron
ENST00000463495 (ALG3-011) 184242961-184243996 processed_transcript
ENST00000477959 (ALG3-009) 184244329-184245342 retained_intron
ENST00000482048 (ALG3-008) 184245067-184248929 retained_intron
ENST00000485912 (ALG3-012) 184242459-184243589 retained_intron
ENST00000488976 (ALG3-005) 184244778-184248962 retained_intron
ENSG00000221120 (MIR1224)
microRNA 1224 		ENST00000408193 (MIR1224-201) 184241405-184241489 miRNA
CIL_0005FP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003234-ENSMUSG00000046613 CGP 10090 16:20548577-20605377
GeneTranscriptPositionBiotype
ENSMUSG00000003234 (Abcf3)
ATP-binding cassette, sub-family F (GCN20), member 3 		ENSMUST00000003319 (Abcf3-001) 20548577-20561379 protein_coding
ENSMUST00000135861 (Abcf3-002) 20559344-20560270 retained_intron
ENSMUST00000148679 (Abcf3-003) 20559657-20560818 retained_intron
ENSMUST00000152339 (Abcf3-004) 20549668-20551669 retained_intron
ENSMUST00000154660 (Abcf3-005) 20550577-20558873 retained_intron
ENSMUSG00000046613 (Vwa5b2)
von Willebrand factor A domain containing 5B2 		ENSMUST00000046188 (Vwa5b2-005) 20602775-20605377 retained_intron
ENSMUST00000096197 (Vwa5b2-201) 20589582-20605377 protein_coding
ENSMUST00000100074 (Vwa5b2-001) 20589471-20598467 protein_coding
ENSMUST00000145483 (Vwa5b2-003) 20590090-20592389 retained_intron
ENSMUST00000149236 (Vwa5b2-002) 20590146-20598462 nonsense_mediated_decay
ENSMUST00000159736 (Vwa5b2-006) 20589582-20590736 processed_transcript
ENSMUST00000159780 (Vwa5b2-004) 20591156-20605374 protein_coding
ENSMUST00000161257 (Vwa5b2-008) 20589851-20591220 retained_intron
ENSMUST00000161715 (Vwa5b2-009) 20590059-20590531 retained_intron
ENSMUST00000162919 (Vwa5b2-007) 20589584-20591186 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FP_0001ENSG00000145198ENST00000273794ENST00000426955ENST00000461141ENST00000493493ENSG00000161204ENST00000292808ENST00000429586ENST00000468892ENST00000473311ENST00000498136ENSG00000214160ENST00000397676ENST00000411922ENST00000414845ENST00000423996ENST00000445626ENST00000446569ENST00000455059ENST00000461415ENST00000463495ENST00000477959ENST00000482048ENST00000485912ENST00000488976ENSG00000221120ENST00000408193CIL_0005FP_0002ENSMUSG00000003234ENSMUST00000003319ENSMUST00000135861ENSMUST00000152339ENSMUST00000154660ENSMUSG00000046613ENSMUST00000046188ENSMUST00000096197ENSMUST00000100074ENSMUST00000145483ENSMUST00000149236ENSMUST00000159780ENSMUST00000161257ENSMUST00000161715ENSMUST00000162919
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145198 ENST00000273794 N/A N/A N/A 1.707±0.82 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426955 N/A N/A N/A 1.782±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461141 N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A
ENST00000474580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493493 N/A N/A N/A N/A N/A 0.630±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000161204 ENST00000292808 5.924±0.00 7.992±0.00 N/A 6.149±0.00 8.679±0.00 4.019±1.23 N/A 9.593±0.00 5.571±0.00 6.047±0.00 6.091±0.00 5.558±0.00 3.861±0.00 N/A
ENST00000421340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429586 8.862±0.00 9.927±0.00 2.424±0.00 10.698±4.19 5.881±4.87 3.449±1.98 8.156±5.90 9.076±4.34 4.819±1.32 2.439±0.34 7.812±4.14 26.921±18.25 20.536±3.76 22.155±1.52
ENST00000463685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468892 N/A 9.931±0.00 N/A N/A N/A N/A N/A N/A 4.579±0.00 3.879±0.00 N/A 10.871±0.00 N/A N/A
ENST00000471226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.891±0.00 N/A N/A N/A
ENST00000475728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498136 N/A N/A 2.851±0.00 N/A 1.961±0.00 N/A N/A N/A 2.149±0.00 3.227±0.00 N/A 3.105±0.00 7.799±0.00 6.800±0.00
ENSG00000214160 ENST00000397676 3.644±0.00 9.821±0.00 N/A 2.118±0.71 6.587±0.00 4.358±3.65 1.493±0.00 7.118±0.00 14.340±0.00 2.611±1.28 3.213±0.00 12.478±7.61 21.850±13.77 11.349±2.38
ENST00000411922 N/A N/A 1.215±0.00 N/A 0.338±0.00 N/A 0.129±0.00 N/A N/A N/A 2.734±0.00 N/A N/A N/A
ENST00000414845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.757±0.00 N/A N/A
ENST00000423996 9.742±0.00 8.601±0.00 N/A N/A 8.223±0.00 5.458±0.00 0.131±0.00 N/A N/A N/A N/A 27.166±0.00 16.000±0.00 12.050±0.00
ENST00000445626 N/A N/A N/A N/A N/A 0.357±0.00 N/A N/A N/A 0.552±0.00 0.900±0.00 5.996±4.80 3.083±0.00 N/A
ENST00000446569 4.203±0.00 N/A N/A N/A 5.146±0.00 2.531±1.16 1.169±0.80 N/A 1.114±0.00 N/A 5.589±0.00 N/A 8.051±0.00 8.605±0.00
ENST00000455059 N/A N/A N/A N/A N/A N/A N/A N/A 0.591±0.00 N/A N/A 0.670±0.00 N/A N/A
ENST00000461415 N/A N/A N/A N/A 0.723±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463495 N/A N/A 6.007±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477959 N/A N/A N/A N/A 0.912±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.818±0.00 N/A N/A
ENST00000485912 N/A 2.930±0.00 0.930±0.00 N/A 0.959±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488976 N/A N/A N/A N/A N/A N/A N/A N/A 0.582±0.00 1.227±0.00 N/A N/A N/A N/A
ENSG00000221120 ENST00000408193 N/A N/A N/A N/A N/A 2.289±0.00 N/A N/A N/A N/A N/A N/A N/A 2.281±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003234 ENSMUST00000003319 12.629±0.64 3.198±0.69 9.406±1.09 11.458±4.15 6.024±1.68 6.918±0.96 5.529±1.42 9.693±2.36 8.727±2.95 7.660±1.10 9.511±2.51 8.447±4.34 12.000±2.53 15.594±8.34
ENSMUST00000135861 N/A 10.416±1.13 N/A N/A 7.931±0.22 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.281±0.00 N/A N/A
ENSMUST00000154660 9.543±1.18 7.010±1.08 N/A 17.131±0.00 8.204±1.85 4.913±0.00 N/A 9.334±2.04 7.271±0.34 10.679±0.00 N/A N/A 16.791±0.00 19.585±2.28
ENSMUSG00000046613 ENSMUST00000046188 0.124±0.09 N/A 0.786±0.00 N/A 0.053±0.04 0.787±0.00 0.013±0.01 0.041±0.04 0.030±0.02 0.048±0.04 0.028±0.01 0.153±0.13 0.032±0.01 0.065±0.03
ENSMUST00000096197 0.102±0.08 0.464±0.19 1.109±0.37 6.385±1.09 0.010±0.00 1.111±0.51 N/A 0.028±0.00 0.136±0.00 0.036±0.00 N/A 0.100±0.02 0.062±0.01 0.053±0.01
ENSMUST00000100074 N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A 0.130±0.00 0.029±0.00 N/A N/A N/A N/A
ENSMUST00000145483 N/A N/A N/A 4.216±0.00 N/A N/A 0.012±0.00 N/A 0.052±0.00 N/A N/A 0.072±0.00 0.054±0.02 0.027±0.00
ENSMUST00000149236 N/A N/A N/A N/A 0.039±0.01 N/A N/A 0.022±0.00 N/A N/A N/A 0.019±0.00 N/A N/A
ENSMUST00000159736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159780 0.029±0.02 0.368±0.03 0.340±0.00 7.379±0.00 0.018±0.01 0.620±0.19 0.024±0.00 0.019±0.01 0.099±0.09 0.045±0.01 N/A 0.089±0.06 0.041±0.02 0.032±0.03
ENSMUST00000161257 N/A N/A N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A 0.126±0.00 N/A
ENSMUST00000161715 N/A N/A N/A N/A N/A N/A N/A 0.105±0.01 N/A N/A N/A N/A N/A N/A
ENSMUST00000162919 N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A

Loading