C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TRAF-interacting protein with forkhead-associated domain
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046688 Tifa 10090 + 3:127789872-127832135 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054483 Tifa-001 127789872-127798392 protein_coding
  ENSMUST00000163775 Tifa-004 127789914-127797950 protein_coding
  ENSMUST00000164447 Tifa-002 127790657-127797949 protein_coding
  ENSMUST00000166778 Tifa-005 127789916-127832135 processed_transcript
  ENSMUST00000171621 Tifa-003 127791381-127798388 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054483ENSMUST00000163775ENSMUST00000164447ENSMUST00000166778ENSMUST00000171621
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054483 1.140±0.27 1.543±0.63 2.595±0.03 0.573±0.13 2.882±0.92 8.277±0.79 0.454±0.15 1.526±0.30 2.750±0.93 1.632±0.28 0.223±0.09 1.458±0.77 0.282±0.13 0.442±0.04
ENSMUST00000163775 N/A N/A N/A 0.943±0.00 N/A N/A N/A N/A N/A N/A 0.276±0.00 0.596±0.00 0.145±0.05 N/A
ENSMUST00000164447 0.485±0.13 N/A 2.007±0.00 N/A 1.478±1.07 N/A 0.193±0.03 0.691±0.23 1.630±0.27 N/A 0.142±0.04 1.913±0.07 0.497±0.40 0.278±0.03
ENSMUST00000166778 N/A 5.746±1.69 N/A N/A N/A N/A N/A N/A 1.155±0.00 N/A N/A 1.210±0.15 N/A N/A
ENSMUST00000171621 0.854±0.42 N/A 1.369±0.29 0.510±0.03 1.161±0.53 N/A 0.389±0.24 0.527±0.20 3.591±1.87 0.745±0.06 0.219±0.12 0.896±0.56 0.462±0.15 0.184±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WR CIL_0008WR_0002 VISTA 3:127326841-127927904
CIL_00080F CIL_00080F_0002 VISTA 3:127613726-128215301
CIL_0007P9 CIL_0007P9_0002 UCNEbase 3:127625906-129219414

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007249 IDA I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091111 TIFA TRAF-interacting protein with forkhead-associated domain protein_coding Danio_rerio
ENSG00000145365 TIFA TRAF-interacting protein with forkhead-associated domain protein_coding Homo_sapiens

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