C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046834 Krt1 10090 - 15:101845428-101850786 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023790 Krt1-201 101845428-101850786 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023790
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023790 0.026±0.01 0.269±0.09 0.548±0.19 2.591±1.51 2.043±1.76 0.161±0.10 0.022±0.01 0.024±0.01 0.036±0.04 0.147±0.03 1.231±0.12 0.480±0.35 0.313±0.32 0.024±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_0012 CGP 15:101810689-101850786
CIL_00033Q CIL_00033Q_000T CGP 15:101845428-101869705

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001867 IEA complement activation, lectin pathway
GO:0001895 IEA retina homeostasis
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0016020 IEA membrane
GO:0030246 IEA carbohydrate binding
GO:0031012 IDA extracellular matrix
GO:0045095 IDA keratin filament
GO:0050728 IGI negative regulation of inflammatory response
GO:0061436 IMP establishment of skin barrier
GO:0070062 IEA extracellular vesicular exosome
GO:0072562 IEA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017624 krt4 keratin 4 protein_coding Danio_rerio
ENSDARG00000043242 si:dkey-222f2.1 si:dkey-222f2.1 protein_coding Danio_rerio
ENSDARG00000058358 krt8 keratin 8 protein_coding Danio_rerio
ENSDARG00000058371 krt5 keratin 5 protein_coding Danio_rerio
ENSDARG00000058462 zgc:158846 zgc:158846 protein_coding Danio_rerio
ENSG00000167768 KRT1 keratin 1 protein_coding Homo_sapiens

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