C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor-like 4A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047446 Arl4a 10090 - 12:40005447-40038025 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000101472 Arl4a-002 40035822-40038025 protein_coding
  ENSMUST00000136441 Arl4a-003 40005447-40037376 nonsense_mediated_decay
  ENSMUST00000138572 Arl4a-006 40009609-40014484 processed_transcript
  ENSMUST00000144910 Arl4a-004 40005447-40037367 nonsense_mediated_decay
  ENSMUST00000146905 Arl4a-001 40033291-40037429 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101472ENSMUST00000136441ENSMUST00000144910ENSMUST00000146905
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101472 15.054±3.78 12.779±2.21 10.616±2.77 9.255±2.80 9.007±3.18 6.422±1.91 4.604±0.39 6.240±0.45 16.519±13.27 5.329±0.96 10.921±1.09 6.872±4.07 9.180±3.39 197.338±52.35
ENSMUST00000136441 1.340±0.08 0.965±0.21 N/A N/A 0.916±0.32 1.425±0.73 0.318±0.08 0.789±0.06 1.777±1.11 0.714±0.28 N/A 0.791±0.43 0.644±0.00 N/A
ENSMUST00000144910 N/A N/A N/A N/A N/A 1.277±0.00 N/A N/A 8.466±0.29 N/A N/A N/A N/A N/A
ENSMUST00000146905 3.637±1.77 N/A 3.180±0.39 4.257±2.67 1.249±0.17 1.738±0.48 0.739±0.09 0.768±0.11 2.249±1.21 0.765±0.08 2.478±0.22 1.784±1.20 1.916±0.90 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055B CIL_00055B_0002 CGP 12:40005447-40134228

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 TAS GTPase activity
GO:0005515 IEA protein binding
GO:0005525 ISS GTP binding
GO:0005634 IDA nucleus
GO:0005730 ISS nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 ISS plasma membrane
GO:0006184 TAS GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0050873 IDA brown fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033182 arl4ab ADP-ribosylation factor-like 4ab protein_coding Danio_rerio
ENSG00000122644 ARL4A ADP-ribosylation factor-like 4A protein_coding Homo_sapiens

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