C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136441 Arl4a-003 ENSMUSG00000047446 10090 - 12:40005447-40037376 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000136441
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000136441 1.340±0.08 0.965±0.21 0.916±0.32 1.425±0.73 0.318±0.08 0.789±0.06 1.777±1.11 0.714±0.28 0.791±0.43 0.644±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055B CIL_00055B_0002 CGP 12:40005447-40134228

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 TAS GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 TAS GTP catabolic process
GO:0050873 IDA brown fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356797 ARL4A-002 protein_coding Homo_sapiens 0 305
ENST00000396662 ARL4A-001 protein_coding Homo_sapiens 0 316
ENST00000396663 ARL4A-201 protein_coding Homo_sapiens 0 316
ENST00000396664 ARL4A-004 protein_coding Homo_sapiens 0 305
ENST00000404372 RP1-99E18.2-001 processed_pseudogene Homo_sapiens 0 265
ENST00000404894 ARL4A-005 protein_coding Homo_sapiens 0 305
ENST00000439721 ARL4A-003 protein_coding Homo_sapiens 0 265
ENST00000503220 ARL4P-001 processed_pseudogene Homo_sapiens 0 267
ENST00000507378 RP11-632F7.1-001 processed_pseudogene Homo_sapiens 0 281

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