C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00055B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000033182-ENSDARG00000010728 CGP 7955 19:32584703-32618294
GeneTranscriptPositionBiotype
ENSDARG00000010728 (scin)
scinderin 		ENSDART00000046609 (scin-001) 32593073-32618294 protein_coding
ENSDARG00000033182 (arl4ab)
ADP-ribosylation factor-like 4ab 		ENSDART00000040810 (arl4ab-001) 32584703-32587248 protein_coding
CIL_00055B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047446-ENSMUSG00000002565 CGP 10090 12:40005447-40134228
GeneTranscriptPositionBiotype
ENSMUSG00000002565 (Scin)
scinderin 		ENSMUST00000002640 (Scin-001) 40059773-40134228 protein_coding
ENSMUST00000078481 (Scin-002) 40059769-40134183 protein_coding
ENSMUSG00000047446 (Arl4a)
ADP-ribosylation factor-like 4A 		ENSMUST00000101472 (Arl4a-002) 40035822-40038025 protein_coding
ENSMUST00000136441 (Arl4a-003) 40005447-40037376 nonsense_mediated_decay
ENSMUST00000138572 (Arl4a-006) 40009609-40014484 processed_transcript
ENSMUST00000144910 (Arl4a-004) 40005447-40037367 nonsense_mediated_decay
ENSMUST00000146905 (Arl4a-001) 40033291-40037429 protein_coding
ENSMUSG00000086315 (Arl4aos)
ADP-ribosylation factor-like 4A, opposite strand 		ENSMUST00000135883 (Arl4aos-001) 40038099-40040027 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055B_0001ENSDARG00000010728ENSDART00000046609ENSDARG00000033182ENSDART00000040810CIL_00055B_0002ENSMUSG00000002565ENSMUST00000002640ENSMUST00000078481ENSMUSG00000047446ENSMUST00000101472ENSMUST00000136441ENSMUST00000138572ENSMUST00000144910ENSMUST00000146905ENSMUSG00000086315ENSMUST00000135883
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055B_0001ENSDARG00000010728ENSDART00000046609ENSDARG00000033182ENSDART00000040810CIL_00055B_0002ENSMUSG00000002565ENSMUST00000002640ENSMUST00000078481ENSMUSG00000047446ENSMUST00000101472ENSMUST00000136441ENSMUST00000144910ENSMUST00000146905ENSMUSG00000086315ENSMUST00000135883
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010728 ENSDART00000046609 N/A N/A N/A 0.491±0.38 N/A N/A 4.877±1.73 11.674±0.00 0.115±0.00 N/A 2.397±0.00 N/A N/A N/A
ENSDARG00000033182 ENSDART00000040810 N/A N/A N/A 20.850±5.79 N/A N/A 30.937±13.65 10.761±1.02 2.083±0.00 N/A 16.828±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002565 ENSMUST00000002640 1.188±1.37 0.941±0.21 0.522±0.06 0.014±0.00 1.528±0.75 28.716±4.16 0.452±0.06 10.468±4.07 0.048±0.02 0.684±0.38 0.991±0.31 0.804±0.41 0.930±0.75 0.111±0.03
ENSMUST00000078481 1.976±0.13 0.563±0.27 N/A 0.034±0.00 0.433±0.28 94.009±17.29 0.513±0.31 14.800±1.57 0.025±0.01 0.355±0.15 N/A 1.076±0.66 0.160±0.01 0.157±0.10
ENSMUSG00000047446 ENSMUST00000101472 15.054±3.78 12.779±2.21 10.616±2.77 9.255±2.80 9.007±3.18 6.422±1.91 4.604±0.39 6.240±0.45 16.519±13.27 5.329±0.96 10.921±1.09 6.872±4.07 9.180±3.39 197.338±52.35
ENSMUST00000136441 1.340±0.08 0.965±0.21 N/A N/A 0.916±0.32 1.425±0.73 0.318±0.08 0.789±0.06 1.777±1.11 0.714±0.28 N/A 0.791±0.43 0.644±0.00 N/A
ENSMUST00000138572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144910 N/A N/A N/A N/A N/A 1.277±0.00 N/A N/A 8.466±0.29 N/A N/A N/A N/A N/A
ENSMUST00000146905 3.637±1.77 N/A 3.180±0.39 4.257±2.67 1.249±0.17 1.738±0.48 0.739±0.09 0.768±0.11 2.249±1.21 0.765±0.08 2.478±0.22 1.784±1.20 1.916±0.90 N/A
ENSMUSG00000086315 ENSMUST00000135883 0.049±0.00 0.256±0.12 0.020±0.01 0.112±0.04 N/A 0.279±0.08 N/A N/A 0.050±0.03 0.195±0.00 0.066±0.00 0.217±0.11 0.030±0.02 31.024±2.69

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