C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047528 Als2cr12 10090 - 1:58646903-58695989 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055313 Als2cr12-001 58658120-58695953 protein_coding
  ENSMUST00000185953 Als2cr12-003 58666895-58695960 retained_intron
  ENSMUST00000188772 Als2cr12-002 58646903-58695989 protein_coding
  ENSMUST00000188839 Als2cr12-006 58676196-58691050 retained_intron
  ENSMUST00000191252 Als2cr12-004 58658363-58692442 nonsense_mediated_decay
  ENSMUST00000191565 Als2cr12-005 58658120-58692442 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055313ENSMUST00000185953ENSMUST00000188772ENSMUST00000188839ENSMUST00000191252ENSMUST00000191565
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055313 N/A 0.090±0.00 N/A N/A N/A N/A 0.205±0.00 N/A 0.147±0.00 0.019±0.00 0.110±0.01 N/A 12.098±2.39
ENSMUST00000185953 0.176±0.00 0.107±0.00 0.008±0.00 0.226±0.00 0.095±0.00 0.032±0.00 N/A 0.007±0.00 0.044±0.03 N/A 0.135±0.02 0.018±0.00 N/A
ENSMUST00000188772 N/A 0.153±0.00 0.066±0.01 N/A N/A 0.088±0.00 0.108±0.00 0.057±0.00 0.039±0.00 0.027±0.00 0.269±0.08 0.264±0.26 35.355±5.99
ENSMUST00000188839 0.122±0.00 N/A N/A 1.085±0.35 0.248±0.18 0.090±0.03 0.234±0.00 N/A 0.072±0.00 0.078±0.00 0.612±0.19 N/A N/A
ENSMUST00000191252 N/A N/A N/A N/A N/A 0.080±0.00 N/A 0.014±0.00 N/A 0.033±0.00 0.336±0.00 N/A 67.279±0.00
ENSMUST00000191565 N/A 0.180±0.11 0.016±0.01 0.660±0.00 0.113±0.04 0.139±0.00 0.260±0.00 0.048±0.04 0.080±0.04 0.053±0.03 0.306±0.13 0.581±0.19 32.707±24.55

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001520 IDA outer dense fiber
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0035686 IDA sperm fibrous sheath
GO:0036126 IDA sperm flagellum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000155749 ALS2CR12 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 protein_coding Homo_sapiens

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