C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: low density lipoprotein receptor class A domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048058 Ldlrad3 10090 - 2:101950203-102186385 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058790 Ldlrad3-001 101950203-102186385 protein_coding
  ENSMUST00000111222 Ldlrad3-002 101950203-102186358 protein_coding
  ENSMUST00000127888 Ldlrad3-003 102111569-102138119 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058790ENSMUST00000111222ENSMUST00000127888
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058790 5.708±0.32 4.022±0.33 3.399±0.35 5.532±3.81 4.029±1.43 10.426±0.89 2.045±0.40 9.452±0.56 2.258±0.40 8.288±0.78 1.442±0.57 7.236±3.63 1.477±0.74 0.863±0.41
ENSMUST00000111222 N/A N/A 0.655±0.00 0.940±0.33 1.028±0.00 N/A N/A N/A 0.322±0.05 N/A 0.501±0.00 2.594±1.36 0.500±0.18 0.083±0.00
ENSMUST00000127888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.150±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001540 IDA beta-amyloid binding
GO:0005886 IDA plasma membrane
GO:0006898 IDA receptor-mediated endocytosis
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0070613 IDA regulation of protein processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078600 ldlrad3 low density lipoprotein receptor class A domain containing 3 protein_coding Danio_rerio
ENSG00000179241 LDLRAD3 low density lipoprotein receptor class A domain containing 3 protein_coding Homo_sapiens

Loading