C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: low density lipoprotein receptor class A domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058790 Ldlrad3-001 ENSMUSG00000048058 10090 - 2:101950203-102186385 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058790
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058790 5.708±0.32 4.022±0.33 3.399±0.35 5.532±3.81 4.029±1.43 10.426±0.89 2.045±0.40 9.452±0.56 2.258±0.40 8.288±0.78 1.442±0.57 7.236±3.63 1.477±0.74 0.863±0.41

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001540 IDA beta-amyloid binding
GO:0005886 IDA plasma membrane
GO:0006898 IDA receptor-mediated endocytosis
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0070613 IDA regulation of protein processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315571 LDLRAD3-001 protein_coding Homo_sapiens 0 1419
ENST00000524419 LDLRAD3-003 protein_coding Homo_sapiens 0 773
ENST00000528989 LDLRAD3-002 protein_coding Homo_sapiens 0 1085
ENST00000532490 LDLRAD3-004 processed_transcript Homo_sapiens 0 196

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