C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NACHT and WD repeat domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048148 Nwd1 10090 + 8:72646711-72714746 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000093427 Nwd1-201 72646711-72714738 protein_coding
  ENSMUST00000160443 Nwd1-007 72653486-72708072 nonsense_mediated_decay
  ENSMUST00000160912 Nwd1-005 72657086-72708033 protein_coding
  ENSMUST00000161254 Nwd1-002 72646771-72714746 protein_coding
  ENSMUST00000161386 Nwd1-003 72646711-72693713 protein_coding
  ENSMUST00000161557 Nwd1-001 72646722-72708002 nonsense_mediated_decay
  ENSMUST00000162248 Nwd1-006 72681791-72693110 processed_transcript
  ENSMUST00000163026 Nwd1-004 72657086-72708033 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000093427ENSMUST00000160443ENSMUST00000160912ENSMUST00000161254ENSMUST00000161386ENSMUST00000161557ENSMUST00000162248ENSMUST00000163026
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000093427 0.058±0.00 N/A 0.459±0.29 0.013±0.01 N/A 0.020±0.00 N/A 0.004±0.00 0.282±0.11 0.211±0.10 0.159±0.02 0.132±0.06
ENSMUST00000160443 0.077±0.00 N/A N/A 0.017±0.01 0.161±0.00 N/A 0.044±0.01 0.002±0.00 N/A N/A N/A N/A
ENSMUST00000160912 N/A N/A N/A N/A N/A 0.037±0.00 N/A 0.009±0.00 N/A N/A N/A N/A
ENSMUST00000161254 0.018±0.00 0.038±0.01 N/A 0.027±0.00 0.021±0.00 0.006±0.00 0.015±0.00 0.009±0.00 N/A 0.159±0.04 0.575±0.28 N/A
ENSMUST00000161386 0.051±0.03 0.043±0.01 N/A N/A 0.120±0.00 0.030±0.00 0.017±0.01 N/A 0.161±0.00 0.234±0.15 0.420±0.09 N/A
ENSMUST00000161557 N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A N/A
ENSMUST00000162248 N/A 0.134±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163026 N/A N/A N/A N/A 0.037±0.00 0.037±0.02 N/A N/A 0.153±0.03 N/A 0.237±0.00 0.174±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G1 CIL_0006G1_0002 CGP 8:72572103-72714746
CIL_0006G2 CIL_0006G2_0002 CGP 8:72646711-72758203

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076110 nwd1 NACHT and WD repeat domain containing 1 protein_coding Danio_rerio
ENSG00000188039 NWD1 NACHT and WD repeat domain containing 1 protein_coding Homo_sapiens

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