C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006G2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188039-ENSG00000127511 CGP 9606 19:16719976-16880353
GeneTranscriptPositionBiotype
ENSG00000127511 (SIN3B)
SIN3 transcription regulator family member B 		ENST00000248054 (SIN3B-001) 16829400-16880350 protein_coding
ENST00000379803 (SIN3B-003) 16829407-16880353 protein_coding
ENST00000594235 (SIN3B-005) 16877162-16878942 processed_transcript
ENST00000594372 (SIN3B-008) 16865122-16869623 retained_intron
ENST00000595049 (SIN3B-010) 16875931-16878706 retained_intron
ENST00000595541 (SIN3B-004) 16863274-16878961 protein_coding
ENST00000595900 (SIN3B-012) 16869882-16872666 processed_transcript
ENST00000596638 (SIN3B-006) 16841952-16863286 protein_coding
ENST00000596802 (SIN3B-002) 16829407-16855745 protein_coding
ENST00000599880 (SIN3B-007) 16863097-16865590 processed_transcript
ENST00000601141 (SIN3B-011) 16876939-16879060 retained_intron
ENST00000602204 (SIN3B-009) 16869969-16871638 retained_intron
ENSG00000188039 (NWD1)
NACHT and WD repeat domain containing 1 		ENST00000379808 (NWD1-201) 16731167-16817963 protein_coding
ENST00000438489 (NWD1-003) 16731195-16816726 nonsense_mediated_decay
ENST00000518676 (NWD1-002) 16719976-16817953 nonsense_mediated_decay
ENST00000524140 (NWD1-001) 16719980-16817963 protein_coding
ENST00000549814 (NWD1-006) 16720049-16817123 protein_coding
ENST00000552788 (NWD1-005) 16731198-16817598 protein_coding
ENSG00000268743 (CTD-2538G9.5)
 ENST00000600987 (CTD-2538G9.5-001) 16844025-16846473 sense_intronic
ENSG00000269799 (CTD-2538G9.6)
 ENST00000601661 (CTD-2538G9.6-001) 16801426-16801714 sense_intronic
CIL_0006G2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048148-ENSMUSG00000031622 CGP 10090 8:72646711-72758203
GeneTranscriptPositionBiotype
ENSMUSG00000031622 (Sin3b)
transcriptional regulator, SIN3B (yeast) 		ENSMUST00000004494 (Sin3b-201) 72723288-72758203 protein_coding
ENSMUST00000109950 (Sin3b-202) 72723288-72739910 protein_coding
ENSMUSG00000048148 (Nwd1)
NACHT and WD repeat domain containing 1 		ENSMUST00000093427 (Nwd1-201) 72646711-72714738 protein_coding
ENSMUST00000160443 (Nwd1-007) 72653486-72708072 nonsense_mediated_decay
ENSMUST00000160912 (Nwd1-005) 72657086-72708033 protein_coding
ENSMUST00000161254 (Nwd1-002) 72646771-72714746 protein_coding
ENSMUST00000161386 (Nwd1-003) 72646711-72693713 protein_coding
ENSMUST00000161557 (Nwd1-001) 72646722-72708002 nonsense_mediated_decay
ENSMUST00000162248 (Nwd1-006) 72681791-72693110 processed_transcript
ENSMUST00000163026 (Nwd1-004) 72657086-72708033 protein_coding
ENSMUSG00000093276 (Gm26237)
predicted gene, 26237 		ENSMUST00000175535 (Gm26237-201) 72684314-72684438 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006G2_0001ENSG00000127511ENST00000248054ENST00000379803ENST00000594235ENST00000594372ENST00000595049ENST00000595541ENST00000595900ENST00000596638ENST00000596802ENST00000599880ENST00000601141ENST00000602204ENSG00000188039ENST00000379808ENST00000438489ENST00000518676ENST00000524140ENST00000549814ENST00000552788ENSG00000268743ENST00000600987ENSG00000269799ENST00000601661CIL_0006G2_0002ENSMUSG00000031622ENSMUST00000004494ENSMUST00000109950ENSMUSG00000048148ENSMUST00000093427ENSMUST00000160443ENSMUST00000160912ENSMUST00000161254ENSMUST00000161386ENSMUST00000161557ENSMUST00000162248ENSMUST00000163026ENSMUSG00000093276ENSMUST00000175535
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006G2_0001ENSG00000127511ENST00000248054ENST00000379803ENST00000594372ENST00000595049ENST00000595541ENST00000596802ENSG00000188039ENST00000379808ENST00000438489ENST00000518676ENST00000549814ENST00000552788ENSG00000268743ENST00000600987ENSG00000269799ENST00000601661CIL_0006G2_0002ENSMUSG00000031622ENSMUST00000004494ENSMUST00000109950ENSMUSG00000048148ENSMUST00000093427ENSMUST00000160443ENSMUST00000160912ENSMUST00000161254ENSMUST00000161386ENSMUST00000161557ENSMUST00000162248ENSMUST00000163026ENSMUSG00000093276ENSMUST00000175535
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127511 ENST00000248054 10.011±0.00 7.209±0.00 1.184±0.00 5.042±4.20 4.713±0.00 8.743±0.00 2.171±1.90 3.328±2.90 1.164±0.00 7.808±6.36 3.850±0.00 13.689±5.61 12.606±1.00 20.049±3.50
ENST00000379803 N/A N/A N/A 4.613±0.00 N/A N/A N/A N/A 0.348±0.00 N/A 1.538±0.93 N/A 2.794±0.00 N/A
ENST00000594235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.277±0.00 N/A N/A N/A
ENST00000595049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.098±0.00 19.185±0.00 33.398±0.00
ENST00000595541 N/A N/A 0.780±0.00 N/A 1.077±0.00 N/A 0.666±0.00 0.656±0.00 N/A N/A N/A 3.188±0.00 5.702±0.00 11.050±0.00
ENST00000595900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596802 N/A N/A N/A N/A N/A N/A 2.109±0.00 1.255±0.65 0.860±0.00 N/A N/A N/A N/A N/A
ENST00000599880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188039 ENST00000379808 N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A 0.376±0.00 N/A N/A 0.034±0.00 N/A
ENST00000438489 N/A N/A N/A 0.713±0.36 N/A 0.045±0.00 N/A N/A N/A N/A N/A 0.470±0.46 0.010±0.00 0.656±0.23
ENST00000518676 N/A 0.116±0.00 0.031±0.00 N/A 0.066±0.03 0.014±0.00 0.022±0.02 0.128±0.00 N/A N/A N/A N/A N/A N/A
ENST00000524140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549814 N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A
ENST00000552788 0.094±0.00 N/A N/A N/A N/A N/A N/A 0.023±0.00 0.021±0.00 N/A 0.053±0.00 N/A N/A N/A
ENSG00000268743 ENST00000600987 0.310±0.00 1.021±0.00 N/A 0.310±0.00 0.893±0.00 0.123±0.00 0.062±0.00 0.267±0.00 N/A N/A 0.901±0.00 0.391±0.22 0.353±0.14 0.630±0.45
ENSG00000269799 ENST00000601661 0.148±0.00 0.464±0.00 N/A 0.243±0.00 0.078±0.00 0.073±0.00 0.142±0.00 0.233±0.00 0.338±0.00 N/A N/A 5.292±0.00 N/A 0.487±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031622 ENSMUST00000004494 10.007±1.78 17.143±0.55 10.675±0.49 22.327±6.75 8.258±2.79 10.674±2.40 4.122±0.85 7.715±0.64 3.617±0.74 11.878±1.53 2.439±0.24 20.637±8.28 43.166±26.64 8.847±0.33
ENSMUST00000109950 51.785±17.41 109.187±23.49 40.429±6.56 44.778±4.28 48.453±2.62 30.141±12.80 29.834±4.26 52.571±3.70 34.965±10.83 20.161±8.86 11.556±1.00 73.591±21.57 758.729±379.11 163.133±36.24
ENSMUSG00000048148 ENSMUST00000093427 0.058±0.00 N/A N/A 0.459±0.29 0.013±0.01 N/A 0.020±0.00 N/A 0.004±0.00 0.282±0.11 0.211±0.10 0.159±0.02 N/A 0.132±0.06
ENSMUST00000160443 0.077±0.00 N/A N/A N/A 0.017±0.01 0.161±0.00 N/A 0.044±0.01 0.002±0.00 N/A N/A N/A N/A N/A
ENSMUST00000160912 N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A 0.009±0.00 N/A N/A N/A N/A N/A
ENSMUST00000161254 0.018±0.00 0.038±0.01 N/A N/A 0.027±0.00 0.021±0.00 0.006±0.00 0.015±0.00 0.009±0.00 N/A 0.159±0.04 0.575±0.28 N/A N/A
ENSMUST00000161386 0.051±0.03 0.043±0.01 N/A N/A N/A 0.120±0.00 0.030±0.00 0.017±0.01 N/A 0.161±0.00 0.234±0.15 0.420±0.09 N/A N/A
ENSMUST00000161557 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A
ENSMUST00000162248 N/A 0.134±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163026 N/A N/A N/A N/A N/A 0.037±0.00 0.037±0.02 N/A N/A 0.153±0.03 N/A 0.237±0.00 N/A 0.174±0.05
ENSMUSG00000093276 ENSMUST00000175535 N/A N/A N/A 6.048±0.00 N/A N/A 1096.030±0.00 N/A N/A 486.217±0.00 N/A N/A N/A N/A

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