C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology-like domain, family B, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144251 Phldb1-004 ENSMUSG00000048537 10090 - 9:44686308-44713240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverPlacentaENSMUST00000144251
Transcript ID Bladder Brain Colon Kidney Liver Placenta
ENSMUST00000144251 6.933±1.80 9.147±0.00 13.363±3.16 4.313±0.00 0.347±0.00 3.608±1.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0002 VISTA 9:44577224-45180192
CIL_0003MD CIL_0003MD_0003 CGP 9:44686304-44767845

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264029 TREH-001 protein_coding Homo_sapiens 0 198
ENST00000356063 PHLDB1-020 protein_coding Homo_sapiens 0 1858
ENST00000361417 PHLDB1-001 protein_coding Homo_sapiens 0 1236
ENST00000392852 PHLDB1-021 retained_intron Homo_sapiens 0 579
ENST00000524713 PHLDB1-038 processed_transcript Homo_sapiens 0 1439
ENST00000526699 PHLDB1-017 retained_intron Homo_sapiens 0 562
ENST00000526826 PHLDB1-024 retained_intron Homo_sapiens 2e-28 130
ENST00000527500 PHLDB1-040 processed_transcript Homo_sapiens 0 409
ENST00000527898 PHLDB1-009 processed_transcript Homo_sapiens 0 1862
ENST00000528594 PHLDB1-003 nonsense_mediated_decay Homo_sapiens 0 721
ENST00000528875 PHLDB1-018 processed_transcript Homo_sapiens 0 370
ENST00000529005 PHLDB1-026 processed_transcript Homo_sapiens 0 507
ENST00000530994 PHLDB1-002 nonsense_mediated_decay Homo_sapiens 0 721
ENST00000531987 PHLDB1-011 retained_intron Homo_sapiens 0 302
ENST00000532517 PHLDB1-010 retained_intron Homo_sapiens 0 577
ENST00000534140 PHLDB1-019 protein_coding Homo_sapiens 0 2350
ENST00000600882 PHLDB1-202 protein_coding Homo_sapiens 0 1236
ENST00000601898 PHLDB1-203 protein_coding Homo_sapiens 0 291
ENST00000612681 PHLDB1-016 retained_intron Homo_sapiens 0 837
ENST00000614369 PHLDB1-007 processed_transcript Homo_sapiens 0 1858

Loading