C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L29
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048758 Rpl29 10090 + 9:106429454-106431568 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059802 Rpl29-002 106429539-106431567 protein_coding
  ENSMUST00000150576 Rpl29-001 106429454-106431568 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059802ENSMUST00000150576
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059802 35.141±3.84 23.636±6.52 44.346±2.10 N/A 43.149±8.35 38.575±2.42 12.769±1.54 22.483±2.00 44.014±24.21 19.725±2.22 38.498±4.42 58.940±25.91 8.987±0.00 32.087±2.78
ENSMUST00000150576 138.370±39.77 71.678±4.03 380.579±17.58 178.159±113.27 102.941±33.84 175.068±32.90 87.187±21.25 167.486±21.85 263.651±203.37 101.511±8.65 110.065±7.47 152.757±46.53 220.146±169.13 117.132±53.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077717 RPL29 ribosomal protein L29 protein_coding Danio_rerio
ENSG00000162244 RPL29 ribosomal protein L29 protein_coding Homo_sapiens

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