C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 24
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048911 Rnf24 10090 - 2:131298064-131352892 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059372 Rnf24-001 131298064-131352881 protein_coding
  ENSMUST00000110194 Rnf24-003 131298067-131328988 protein_coding
  ENSMUST00000142982 Rnf24-004 131312557-131352892 retained_intron
  ENSMUST00000165420 Rnf24-201 131298065-131313314 protein_coding
  ENSMUST00000183902 Rnf24-002 131302646-131352862 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059372ENSMUST00000110194ENSMUST00000165420ENSMUST00000183902
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059372 4.556±1.92 2.812±0.62 1.560±0.14 11.017±0.94 2.588±1.23 1.652±0.33 1.086±0.28 1.860±0.20 1.100±0.32 2.031±0.69 0.776±0.07 3.333±0.75 2.227±0.41 6.248±0.38
ENSMUST00000110194 N/A N/A N/A N/A N/A N/A N/A 5.323±1.39 N/A N/A N/A 2.122±0.00 N/A N/A
ENSMUST00000165420 4.001±0.40 N/A 2.137±0.02 3.791±0.69 3.028±1.30 2.057±0.30 0.644±0.00 4.824±1.87 1.208±0.46 N/A 0.874±0.11 3.160±0.86 1.422±0.42 0.773±0.00
ENSMUST00000183902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.293±7.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067O CIL_00067O_0003 CGP 2:131234063-131299188
CIL_0004LL CIL_0004LL_0002 CGP 2:131262495-131352892
CIL_00068E CIL_00068E_0003 CGP 2:131298064-131525922

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036965 rnf24 ring finger protein 24 protein_coding Danio_rerio
ENSG00000101236 RNF24 ring finger protein 24 protein_coding Homo_sapiens

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