C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C-type lectin domain family 4, member a1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049037 Clec4a1 10090 + 6:122921848-122934619 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060484 Clec4a1-001 122921848-122934619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060484
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060484 4.325±0.55 0.393±0.10 4.762±0.28 0.191±0.11 5.309±1.81 1.080±0.14 1.255±0.40 0.621±0.11 1.938±1.57 2.321±0.21 0.287±0.13 1.424±0.79 0.761±0.69 0.272±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001K CIL_00001K_0002 CGP 6:122874557-122934619
CIL_0003XR CIL_0003XR_000I CGP 6:122921848-122969875

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008075 illr4 immune-related, lectin-like receptor 4 protein_coding Danio_rerio
ENSDARG00000008182 si:ch73-111e15.1 si:ch73-111e15.1 protein_coding Danio_rerio
ENSDARG00000018327 illr3 immune-related, lectin-like receptor 3 protein_coding Danio_rerio
ENSDARG00000025150 si:dkey-181c13.1 si:dkey-181c13.1 protein_coding Danio_rerio
ENSDARG00000026805 CR847844.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000029461 cd209 CD209 molecule protein_coding Danio_rerio
ENSDARG00000043894 si:ch211-214k5.3 si:ch211-214k5.3 protein_coding Danio_rerio
ENSDARG00000056379 si:ch211-154o6.6 si:ch211-154o6.6 protein_coding Danio_rerio
ENSDARG00000057090 CR847844.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000059254 illr1 immune-related, lectin-like receptor 1 protein_coding Danio_rerio
ENSDARG00000069323 si:ch73-122g19.1 si:ch73-122g19.1 protein_coding Danio_rerio
ENSDARG00000087245 CR847844.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088219 CR847844.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088614 BX936386.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088727 CR847844.6 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089377 si:ch211-232p21.6 si:ch211-232p21.6 protein_coding Danio_rerio
ENSDARG00000092749 si:ch211-133n4.12 si:ch211-133n4.12 protein_coding Danio_rerio
ENSDARG00000094796 si:ch211-133n4.11 si:ch211-133n4.11 protein_coding Danio_rerio
ENSDARG00000094882 illr2 immune-related, lectin-like receptor 2 protein_coding Danio_rerio
ENSDARG00000095424 si:ch211-133n4.7 si:ch211-133n4.7 protein_coding Danio_rerio
ENSDARG00000096624 si:dkey-187i8.2 si:dkey-187i8.2 protein_coding Danio_rerio
ENSG00000111729 CLEC4A C-type lectin domain family 4, member A protein_coding Homo_sapiens

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