C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C-type lectin domain family 4, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111729 CLEC4A 9606 + 12:8123632-8138607 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000229332 CLEC4A-001 8123632-8138607 protein_coding
  ENST00000345999 CLEC4A-004 8123853-8138604 protein_coding
  ENST00000352620 CLEC4A-002 8123879-8138287 protein_coding
  ENST00000360500 CLEC4A-005 8123879-8138287 protein_coding
  ENST00000546339 CLEC4A-003 8123912-8138206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverLungMuscleOvaryPlacentaTestisENST00000229332ENST00000345999ENST00000352620
Transcript ID Adipose Adrenal Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000229332 N/A N/A N/A N/A 0.311±0.00 1.034±0.11 N/A 1.152±0.00 1.368±0.26 1.113±0.00
ENST00000345999 1.383±0.00 3.300±0.00 2.218±0.00 0.729±0.00 N/A 4.254±0.00 N/A 2.030±0.92 1.404±0.12 N/A
ENST00000352620 N/A N/A N/A N/A N/A N/A 0.422±0.00 1.017±0.00 2.095±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001K CIL_00001K_0001 CGP 12:8082211-8138607

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005887 TAS integral component of plasma membrane
GO:0007155 TAS cell adhesion
GO:0007166 TAS cell surface receptor signaling pathway
GO:0030246 IEA carbohydrate binding
GO:0045087 IEA innate immune response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008075 illr4 immune-related, lectin-like receptor 4 protein_coding Danio_rerio
ENSDARG00000008182 si:ch73-111e15.1 si:ch73-111e15.1 protein_coding Danio_rerio
ENSDARG00000018327 illr3 immune-related, lectin-like receptor 3 protein_coding Danio_rerio
ENSDARG00000025150 si:dkey-181c13.1 si:dkey-181c13.1 protein_coding Danio_rerio
ENSDARG00000026805 CR847844.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000029461 cd209 CD209 molecule protein_coding Danio_rerio
ENSDARG00000043894 si:ch211-214k5.3 si:ch211-214k5.3 protein_coding Danio_rerio
ENSDARG00000056379 si:ch211-154o6.6 si:ch211-154o6.6 protein_coding Danio_rerio
ENSDARG00000057090 CR847844.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000059254 illr1 immune-related, lectin-like receptor 1 protein_coding Danio_rerio
ENSDARG00000069323 si:ch73-122g19.1 si:ch73-122g19.1 protein_coding Danio_rerio
ENSDARG00000087245 CR847844.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088219 CR847844.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088614 BX936386.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088727 CR847844.6 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089377 si:ch211-232p21.6 si:ch211-232p21.6 protein_coding Danio_rerio
ENSDARG00000092749 si:ch211-133n4.12 si:ch211-133n4.12 protein_coding Danio_rerio
ENSDARG00000094796 si:ch211-133n4.11 si:ch211-133n4.11 protein_coding Danio_rerio
ENSDARG00000094882 illr2 immune-related, lectin-like receptor 2 protein_coding Danio_rerio
ENSDARG00000095424 si:ch211-133n4.7 si:ch211-133n4.7 protein_coding Danio_rerio
ENSDARG00000096624 si:dkey-187i8.2 si:dkey-187i8.2 protein_coding Danio_rerio
ENSMUSG00000030147 Clec4b1 C-type lectin domain family 4, member b1 protein_coding Mus_musculus
ENSMUSG00000030148 Clec4a2 C-type lectin domain family 4, member a2 protein_coding Mus_musculus
ENSMUSG00000043832 Clec4a3 C-type lectin domain family 4, member a3 protein_coding Mus_musculus
ENSMUSG00000049037 Clec4a1 C-type lectin domain family 4, member a1 protein_coding Mus_musculus
ENSMUSG00000059639 Clec4a4 C-type lectin domain family 4, member a4 protein_coding Mus_musculus
ENSMUSG00000067767 Clec4b2 C-type lectin domain family 4, member b2 protein_coding Mus_musculus

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