C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 134, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188873 Fam134a-004 ENSMUSG00000049339 10090 + 1:75142778-75147909 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungMuscleOvaryPlacentaENSMUST00000188873
Transcript ID Adrenal Breast Colon Liver Lung Muscle Ovary Placenta
ENSMUST00000188873 10.265±0.00 8.510±1.36 12.676±1.02 14.145±0.00 6.731±0.00 1.345±0.45 15.649±4.54 5.359±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0000OL CIL_0000OL_0002 CGP 1:75134554-75147913
CIL_0006E8 CIL_0006E8_0002 CGP 1:75142778-75171629

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273048 FAM134A-002 nonsense_mediated_decay Homo_sapiens 0 2165
ENST00000420189 FAM134A-004 protein_coding Homo_sapiens 0 649
ENST00000430297 FAM134A-001 protein_coding Homo_sapiens 0 1596
ENST00000430747 FAM134A-008 protein_coding Homo_sapiens 0 189
ENST00000443757 FAM134A-006 protein_coding Homo_sapiens 0 191
ENST00000452022 FAM134A-009 protein_coding Homo_sapiens 0 737
ENST00000452293 FAM134A-007 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000458520 FAM134A-005 protein_coding Homo_sapiens 0 765
ENST00000481925 FAM134A-011 retained_intron Homo_sapiens 0 313

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