C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DDB1 and CUL4 associated factor 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058438 Dcaf7-001 ENSMUSG00000049354 10090 + 11:106036872-106059324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058438
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058438 17.325±6.95 21.739±1.41 18.391±0.85 47.222±16.56 22.196±4.37 19.362±3.63 13.876±0.61 18.288±0.72 12.111±2.93 29.462±2.56 7.364±0.27 29.541±7.73 14.855±4.07 29.234±11.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0002 VISTA 11:105834084-106435839
CIL_0006ZT CIL_0006ZT_0002 CGP 11:106008124-106059324
CIL_0002OB CIL_0002OB_0002 CGP 11:106036872-106073612

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0016363 ISS nuclear matrix
GO:0016567 IEA protein ubiquitination
GO:0043234 ISS protein complex
GO:0080008 ISS Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000415273 DCAF7-002 protein_coding Homo_sapiens 0 747
ENST00000431926 DCAF7-004 protein_coding Homo_sapiens 0 1515
ENST00000580091 DCAF7-006 processed_transcript Homo_sapiens 2.99878e-43 178
ENST00000582274 DCAF7-005 processed_transcript Homo_sapiens 0 235
ENST00000614556 DCAF7-001 protein_coding Homo_sapiens 0 1927
ENST00000615512 DCAF7-007 protein_coding Homo_sapiens 0 643

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