C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sal-like 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049532 Sall2 10090 - 14:52311172-52328762 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058326 Sall2-001 52311172-52328762 protein_coding
  ENSMUST00000135523 Sall2-002 52311172-52316323 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058326ENSMUST00000135523
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.03
ENSMUST00000135523 3.602±2.39 2.968±0.74 2.286±0.78 15.249±6.27 2.525±0.33 1.336±0.05 0.666±0.07 6.709±1.47 0.682±0.19 3.493±0.08 0.286±0.08 8.130±1.79 0.877±0.62 0.219±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CX CIL_0008CX_0002 VISTA 14:52247406-52849170
CIL_0002HK CIL_0002HK_0002 CGP 14:52294668-52328762
CIL_00001W CIL_00001W_0002 CGP 14:52311172-52350044

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0016581 IDA NuRD complex
GO:0021915 IMP neural tube development
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075116 SALL2 spalt-like transcription factor 2 protein_coding Danio_rerio
ENSG00000165821 SALL2 spalt-like transcription factor 2 protein_coding Homo_sapiens

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