C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sal-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058326 Sall2-001 ENSMUSG00000049532 10090 - 14:52311172-52328762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000058326
Transcript ID Testis
ENSMUST00000058326 0.062±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CX CIL_0008CX_0002 VISTA 14:52247406-52849170
CIL_0002HK CIL_0002HK_0002 CGP 14:52294668-52328762
CIL_00001W CIL_00001W_0002 CGP 14:52311172-52350044

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0016581 IDA NuRD complex
GO:0021915 IMP neural tube development
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000450879 SALL2-006 protein_coding Homo_sapiens 0 2283
ENST00000537235 SALL2-008 protein_coding Homo_sapiens 0 638
ENST00000541965 SALL2-009 protein_coding Homo_sapiens 0 520
ENST00000546363 SALL2-004 protein_coding Homo_sapiens 0 2283
ENST00000614342 SALL2-001 protein_coding Homo_sapiens 0 3592

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