C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 109, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049687 Fam109b 10090 + 15:82338942-82345743 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050349 Fam109b-001 82341179-82345710 protein_coding
  ENSMUST00000159942 Fam109b-004 82338942-82343259 processed_transcript
  ENSMUST00000161178 Fam109b-002 82340858-82345743 protein_coding
  ENSMUST00000162983 Fam109b-003 82340553-82343273 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastLiverOvaryPlacentaTestisENSMUST00000050349
Transcript ID Adipose Breast Liver Ovary Placenta Testis
ENSMUST00000050349 5.105±0.00 2.098±0.00 21.788±9.17 2.448±1.26 3.756±0.00 2.930±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BB CIL_0004BB_0002 CGP 15:82329532-82345743
CIL_00037D CIL_00037D_0002 CGP 15:82338942-82349091

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001881 IEA receptor recycling
GO:0005515 IEA protein binding
GO:0005769 IEA early endosome
GO:0005802 IEA trans-Golgi network
GO:0007032 IEA endosome organization
GO:0030136 IEA clathrin-coated vesicle
GO:0042147 IEA retrograde transport, endosome to Golgi
GO:0042803 IEA protein homodimerization activity
GO:0055037 IEA recycling endosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067546 FAM109B family with sequence similarity 109, member B protein_coding Danio_rerio
ENSG00000177096 FAM109B family with sequence similarity 109, member B protein_coding Homo_sapiens

Loading