C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004BB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198951-ENSG00000177096 CGP 9606 22:42058354-42079441
GeneTranscriptPositionBiotype
ENSG00000177096 (FAM109B)
family with sequence similarity 109, member B
ENST00000321753 (FAM109B-001) 42074251-42079441 protein_coding
ENST00000419475 (FAM109B-002) 42074357-42077618 protein_coding
ENSG00000198951 (NAGA)
N-acetylgalactosaminidase, alpha-
ENST00000396398 (NAGA-002) 42058354-42070830 protein_coding
ENST00000402937 (NAGA-001) 42059802-42070842 protein_coding
ENST00000403363 (NAGA-003) 42059796-42070830 protein_coding
CIL_0004BB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022453-ENSMUSG00000049687 CGP 10090 15:82329532-82345743
GeneTranscriptPositionBiotype
ENSMUSG00000022452 (Smdt1)
single-pass membrane protein with aspartate rich tail 1
ENSMUST00000023086 (Smdt1-001) 82345954-82349090 protein_coding
ENSMUST00000159054 (Smdt1-005) 82347220-82348869 protein_coding
ENSMUST00000160994 (Smdt1-003) 82338959-82349059 processed_transcript
ENSMUST00000161892 (Smdt1-002) 82346014-82349091 nonsense_mediated_decay
ENSMUST00000162705 (Smdt1-004) 82340986-82349007 processed_transcript
ENSMUSG00000022453 (Naga)
N-acetyl galactosaminidase, alpha
ENSMUST00000023088 (Naga-201) 82329532-82338826 protein_coding
ENSMUSG00000049687 (Fam109b)
family with sequence similarity 109, member B
ENSMUST00000050349 (Fam109b-001) 82341179-82345710 protein_coding
ENSMUST00000159942 (Fam109b-004) 82338942-82343259 processed_transcript
ENSMUST00000161178 (Fam109b-002) 82340858-82345743 protein_coding
ENSMUST00000162983 (Fam109b-003) 82340553-82343273 processed_transcript
ENSMUSG00000064959 (n-R5s41)
nuclear encoded rRNA 5S 41
ENSMUST00000083025 (n-R5s41-201) 82342653-82342771 rRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BB_0001ENSG00000177096ENST00000321753ENST00000419475ENSG00000198951ENST00000396398ENST00000402937ENST00000403363CIL_0004BB_0002ENSMUSG00000022452ENSMUST00000023086ENSMUST00000159054ENSMUST00000160994ENSMUST00000161892ENSMUST00000162705ENSMUSG00000022453ENSMUST00000023088ENSMUSG00000049687ENSMUST00000050349ENSMUST00000159942ENSMUST00000161178ENSMUST00000162983ENSMUSG00000064959ENSMUST00000083025
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BB_0001ENSG00000177096ENST00000321753ENSG00000198951ENST00000396398ENST00000402937ENST00000403363CIL_0004BB_0002ENSMUSG00000022452ENSMUST00000023086ENSMUST00000160994ENSMUST00000161892ENSMUST00000162705ENSMUSG00000022453ENSMUST00000023088ENSMUSG00000049687ENSMUST00000050349ENSMUSG00000064959ENSMUST00000083025
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177096 ENST00000321753 5.819±0.00 6.147±0.00 0.474±0.00 0.490±0.06 3.943±1.35 3.192±1.56 1.207±0.95 2.362±1.98 1.009±0.05 1.381±0.75 0.569±0.00 4.957±2.07 16.059±5.87 3.797±0.00
ENST00000419475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198951 ENST00000396398 7.928±0.00 7.288±0.00 1.081±0.00 1.617±0.02 4.547±0.32 3.545±1.03 2.284±1.28 5.992±1.83 4.744±0.41 4.433±0.45 1.371±1.00 5.583±2.97 18.328±6.02 4.985±0.91
ENST00000402937 3.134±0.00 5.758±0.00 N/A N/A 3.499±0.00 N/A 1.924±1.47 6.426±0.00 N/A N/A 3.116±0.00 5.927±0.03 18.323±0.00 5.723±0.00
ENST00000403363 3.748±0.00 N/A N/A 2.924±0.00 4.047±0.00 2.855±0.25 N/A N/A N/A 9.778±0.00 1.544±0.00 6.945±2.08 22.460±6.06 7.887±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022452 ENSMUST00000023086 121.293±18.72 171.689±19.99 81.026±14.11 68.684±35.17 93.300±29.19 135.360±14.16 104.068±16.81 144.734±17.00 87.131±22.77 106.296±8.16 100.070±6.01 83.452±35.08 48.420±33.30 43.474±3.33
ENSMUST00000159054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 109.045±6.47 42.519±11.14 N/A
ENSMUST00000161892 N/A N/A 18.951±2.89 42.025±0.00 10.881±0.00 N/A N/A 18.407±0.00 N/A N/A 25.642±5.33 20.469±0.21 39.299±12.25 16.983±4.76
ENSMUST00000162705 N/A N/A N/A 56.711±0.00 18.861±0.00 N/A N/A N/A N/A N/A N/A 60.970±0.00 20.436±0.33 22.123±0.00
ENSMUSG00000022453 ENSMUST00000023088 26.239±2.83 28.648±3.93 20.622±0.45 5.465±2.69 28.926±8.50 84.733±8.44 8.483±1.25 49.772±4.36 20.396±6.15 35.593±6.03 2.494±0.69 29.733±3.55 33.472±27.41 9.528±3.00
ENSMUSG00000049687 ENSMUST00000050349 5.105±0.00 N/A N/A N/A 2.098±0.00 N/A N/A N/A 21.788±9.17 N/A N/A 2.448±1.26 3.756±0.00 2.930±0.60
ENSMUST00000159942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064959 ENSMUST00000083025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 41.650±0.00 5.047±0.00 N/A

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