C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NCK-associated protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049690 Nckap5 10090 - 1:125913620-126830799 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057846 Nckap5-003 125914743-126448456 protein_coding
  ENSMUST00000094609 Nckap5-201 125913637-126830632 protein_coding
  ENSMUST00000094610 Nckap5-005 125914960-126023103 protein_coding
  ENSMUST00000112583 Nckap5-202 125913637-126830632 protein_coding
  ENSMUST00000159934 Nckap5-004 126027877-126035125 processed_transcript
  ENSMUST00000160693 Nckap5-008 126258401-126738202 protein_coding
  ENSMUST00000160736 Nckap5-006 125914319-125965200 processed_transcript
  ENSMUST00000161954 Nckap5-001 125913620-126492927 protein_coding
  ENSMUST00000162646 Nckap5-007 126222627-126830799 protein_coding
  ENSMUST00000162647 Nckap5-010 126527540-126830481 retained_intron
  ENSMUST00000162664 Nckap5-009 126525039-126738190 retained_intron
  ENSMUST00000162877 Nckap5-002 125913648-126492742 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057846ENSMUST00000094609ENSMUST00000094610ENSMUST00000112583ENSMUST00000160693ENSMUST00000160736ENSMUST00000161954ENSMUST00000162646ENSMUST00000162664ENSMUST00000162877
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057846 0.272±0.15 N/A N/A 0.396±0.00 0.159±0.05 0.389±0.00 N/A N/A 0.049±0.00 N/A 0.078±0.00 1.799±0.73 0.199±0.14 0.247±0.15
ENSMUST00000094609 N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A
ENSMUST00000094610 N/A 9.713±0.96 N/A N/A 0.766±0.14 1.074±0.15 N/A 1.117±0.01 0.363±0.13 19.978±0.00 N/A N/A N/A 0.591±0.00
ENSMUST00000112583 0.216±0.00 0.734±0.00 0.510±0.00 0.225±0.00 0.221±0.10 N/A 0.289±0.00 N/A 0.068±0.04 N/A 0.079±0.00 1.693±0.70 N/A N/A
ENSMUST00000160693 N/A N/A N/A N/A N/A 1.149±0.00 N/A N/A 0.314±0.09 N/A N/A N/A N/A N/A
ENSMUST00000160736 N/A N/A N/A N/A 0.966±0.03 N/A N/A 1.593±0.00 N/A N/A 0.198±0.00 N/A N/A N/A
ENSMUST00000161954 0.189±0.10 1.424±0.67 0.309±0.00 3.694±0.63 N/A 0.315±0.00 0.750±0.00 0.147±0.01 0.090±0.07 9.499±1.73 0.158±0.02 0.485±0.10 0.129±0.04 0.333±0.00
ENSMUST00000162646 N/A N/A N/A N/A 0.458±0.00 0.946±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162664 N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A
ENSMUST00000162877 N/A N/A N/A N/A N/A 0.371±0.00 N/A N/A 0.103±0.04 N/A 0.053±0.02 1.112±0.00 N/A 0.495±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001W8 CIL_0001W8_0002 CGP 1:125867622-126830799
CIL_0001J4 CIL_0001J4_0002 CGP 1:125913620-127488336

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000176771 NCKAP5 NCK-associated protein 5 protein_coding Homo_sapiens

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